Lonsdalea britannica: CKQ53_09985
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Entry
CKQ53_09985 CDS
T05623
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lbq
Lonsdalea britannica
Brite
KEGG Orthology (KO) [BR:
lbq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbq03032
]
CKQ53_09985
03400 DNA repair and recombination proteins [BR:
lbq03400
]
CKQ53_09985
Enzymes [BR:
lbq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CKQ53_09985
DNA replication proteins [BR:
lbq03032
]
Prokaryotic type
DNA Topoisomerases
CKQ53_09985
DNA repair and recombination proteins [BR:
lbq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CKQ53_09985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AXW87278
UniProt:
A0AAD0SLF4
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All DBs
Position
2193819..2196458
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AA seq
879 aa
AA seq
DB search
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMSKIAHELLSDLDKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLSEVIDGCLAYINDENISLEGLMEHIKGPDFPTAAIINGKRGIEEAYRTGRGKV
YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKMAELVKDKRIEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNHLYSQTQMQVSFGINMVALHQGQPRLMTLKEILSAFVRHRRE
VVTRRTIYELRKARERAHILEGLAIALANIDPIIEMIRQAPTPAEAKAALVSHAWKLGSV
AAMLERAGDDAARPEWLEPEFGIRDGHYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKA
LLEQIAELLFILNSPDRLMEVIREELEAIKEQYNDPRRTEITANSADINIEDLINQEDVV
VTLSHQGYVKYQPLTDYEAQRRGGRGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPVREYEEGLNIFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNDGDELIGVDLTDGSNEVMLFSASGKVVRFSEQAVRAMGRTATG
VRGINLQDDDRVVSLIVPRGDGDILTVTQNGFGKRTAVGEYPVKSRATKGVISIKVSERN
GQVVGAVQVDTADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAEDENVVGLQRVA
EPVEDEELDGVVGVDGESIEEEGDEHESDNDDDEAVDDE
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaattacaccggttaacatcgaagaggagctgaaaagctcg
tatctggactatgccatgtctgttattgtcggacgtgcgttgccagatgttcgcgatggc
ctgaagccggtacaccgtcgcgtactgttcgcgatgaacgtactcgggaatgactggaac
aaaccttataaaaaatcggcccgtgtggtcggggacgtcatcggtaaataccacccccac
ggtgacagtgcggtttacgacaccatcgtgcgtatggctcagccattctcgctgcgttac
atgctggtggatggacagggtaactttggctcgatcgacggagattccgctgccgccatg
cgttacaccgaagttcgcatgtcgaaaatcgcccatgaattgctgtccgatctggacaaa
gaaacggtcgatttcgtgccgaactacgacggcacggaacagattccagacgtcatgccg
acgcgcattcccaacctgctggtcaacggatcttccggtatcgcagtggggatggcgacc
aacattccacctcacaacctgtctgaagtgattgacggctgtctggcctacatcaacgat
gaaaacatcagccttgaaggcttgatggagcacatcaagggacccgatttccctaccgcc
gccatcatcaatggtaagcgcggcatcgaagaagcgtatcgcacaggccgcggcaaggtg
tatatccgcgctcgcgccgaagtcgaagcggatgcgaaaaccggccgtgaaaccatcatc
gtgcatgaaattccttatcaggtgaacaaagctcgcctgattgagaaaatggccgagttg
gtgaaagacaagcgcatcgaaggcatcagcgcgctgcgcgatgagtccgataaggacggg
atgcgtatcgtcatcgagatcaaacgcgatgcggtgggtgaagtagttctgaaccacctc
tactcccagacgcagatgcaggtctccttcggtatcaacatggtggcgctgcatcagggc
caaccgcgtttaatgacgctgaaagagatcctgtccgcatttgttcgtcaccgccgtgaa
gtggtgacgcgccgcacgatttatgagctgcgcaaagcgcgagaacgcgcccatattttg
gaaggtctggccattgcgctggcgaacatcgaccccatcatcgagatgatccgtcaggcg
ccaacgcctgccgaagcgaaagccgcgctggtgtcacatgcctggaaactgggttctgtc
gccgccatgctggaacgtgctggcgacgatgccgcgcgtcctgagtggctggagccggaa
ttcggtattcgcgacggtcactattacctgaccgagcagcaggctcaggccattctggat
ctgcgtctgcagaaactgaccggtctggaacatgaaaagctgctggacgaatacaaggcg
ttgctggagcaaatcgccgaactgctgttcattctgaacagcccggatcgtctgatggaa
gtgattcgcgaagagctcgaagcgatcaaggaacagtacaacgatccacgtcgcaccgag
atcaccgcgaacagcgccgacatcaacatcgaagacctgatcaaccaggaagatgtggtg
gtgacgctgtcccatcagggctacgtgaagtaccagccgttgaccgactatgaggcgcag
cgtcgtggcggacgcggcaagtctgccgcccgcatcaaggaagaggacttcatcgatcgt
ctgctggtggcgaatacccacgatacgatcctgtgcttctccagccgcggtcgtctgtac
tggatgaaagtctatcagctaccggaagccagtcgtggagcccgtggacgtcctatcgtc
aacctgctgccgctggagcctaacgaacgtatcaccgccattctgccggtacgtgaatac
gaagaagggctgaacatctttatggcgacggccagcggtacggtgaagaaaaccgcgctg
accgagttcagccgcccacgcagcgctggcatcatcgccgtcaacctgaacgacggcgac
gaactgattggcgtcgatctgacggatggcagtaacgaagtcatgttgttctccgcttca
ggcaaagtcgtgcgcttctccgagcaggcggtacgtgcgatgggtcgtactgcgaccggt
gtgcgcggtatcaacctgcaggacgatgaccgcgtggtttcgttgattgtgcctcgcggc
gacggcgatatcctgaccgtcacgcagaacggcttcggtaagcgtactgcggtgggtgaa
tatccggtgaaatctcgcgccaccaaaggggtgatctccatcaaggtgagtgagcgtaac
ggacaggtcgtcggcgcggtgcaggtcgatacggccgatcagatcatgatgattaccgat
gccggaacgttggtgcgtacccgcgtatccgaggtcagcatcgtcggtcgtaacacccag
ggcgtcacgctgattcgtactgccgaagacgaaaatgtcgtcggcttgcagcgcgtagcc
gaaccggtggaagatgaagagctggacggcgtcgttggcgtcgacggtgagagcattgaa
gaggaaggcgatgagcacgaatctgacaatgacgacgatgaagccgtagacgacgagtaa
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