Lonsdalea britannica: CKQ53_11520
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Entry
CKQ53_11520 CDS
T05623
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
lbq
Lonsdalea britannica
Pathway
lbq00300
Lysine biosynthesis
lbq00470
D-Amino acid metabolism
lbq01100
Metabolic pathways
lbq01110
Biosynthesis of secondary metabolites
lbq01120
Microbial metabolism in diverse environments
lbq01230
Biosynthesis of amino acids
Module
lbq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lbq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CKQ53_11520
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CKQ53_11520
Enzymes [BR:
lbq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CKQ53_11520
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AXW87544
UniProt:
A0AAD0WL67
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All DBs
Position
2538065..2539282
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AA seq
405 aa
AA seq
DB search
MTKLPAHIVAAIRRLQRQESDPLAAFVYDLTALRRHVRSVMAALPPGVELYYAIKANSER
PILDTVAPWVDGFEISSGGEIERVAGCATARPFVFSGPGKLDSDFDTALQRDVAAVHVES
LHEIARLQRCAQRAGRIQPVFIRINPQLSDGLTTKLAMAGKPTPFGIDESELAAAVAAVD
DASHLRLQGFHVHAMSHQLEADRHRQLLDVYLSRWRCWKAMSRRPETITHLNVGGGIGVD
YLHAEQFDWPSLCRFLGQRLAELDDAPVVRFEPGRFISAYCGYYVVEVLDAKVSHGKGFL
VCRGGTHQFRLPVAQGHDHPVIHLTEDAREPTVWQTWTVVGQLCTPKDVLSRDRRLADVR
IGDLLVLPMAGAYGYNISHADFLCHPRPPQWFVSAAEEGEERHER
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgactaagctgccggcccacatcgtcgcggccattcgtcgcctgcaacggcaggagtcc
gatccgctggcggccttcgtctatgacctgaccgcgctgcggcggcacgtgaggtccgtc
atggcggcgctgccgcccggcgtcgaactttactacgccatcaaggccaacagcgaaagg
ccgattctggacacggtcgcgccgtgggtcgatgggtttgagatctcgtcgggcggggaa
attgagcgggtcgcgggctgcgcaacggcacgtcctttcgtcttctccggtccgggaaaa
ctggattcggatttcgatacggcgctgcaacgcgacgtggcggcggtgcatgtggaaagc
ctgcacgaaatcgcccgtttacaacgctgcgcgcagcgggcagggcgaatacagcctgtg
ttcatccgcatcaatccgcagctgtccgacggcctgaccaccaagttggcgatggcgggt
aaaccgacgccgtttggtattgatgagtccgaattggcggcggcggtcgccgcggttgac
gacgccagccatctgcggctgcaaggctttcacgtgcatgccatgtcgcaccagcttgag
gcggatcgccatcggcaactgctggatgtctatctcagccgttggcgttgctggaaagcg
atgtcgcggaggccggagacgatcacacatctcaacgtcggcggcggcatcggcgtggac
tacctccatgcggaacagtttgactggccgtcgctgtgccgttttctggggcagcgtttg
gccgagctggacgatgcgcccgtggtgcggttcgaaccgggacggttcatcagcgcctac
tgcggttactacgtggttgaggtattggatgccaaagtcagtcacggcaagggattcctc
gtctgccgcggcggtacgcaccaatttcgtctgccggtcgcgcagggccacgaccatcct
gtgattcatctgacggaagacgcgcgcgaaccgacagtctggcaaacgtggacggtggtg
gggcagctgtgtacgcccaaagacgttctgagccgagaccgtcggctggccgatgttcgc
atcggcgatcttctggtgctgccgatggcgggagcctacggctacaacatttcccatgcc
gacttcctgtgccatccgcgtccgccgcagtggtttgtgtcagccgccgaagagggcgag
gagcgtcatgagcgctag
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