Lonsdalea britannica: CKQ53_14420
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Entry
CKQ53_14420 CDS
T05623
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
lbq
Lonsdalea britannica
Brite
KEGG Orthology (KO) [BR:
lbq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbq03016
]
CKQ53_14420
Enzymes [BR:
lbq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CKQ53_14420
Transfer RNA biogenesis [BR:
lbq03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CKQ53_14420
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AXW88867
UniProt:
A0AAD0WMI0
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Position
complement(3156872..3157993)
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AA seq
373 aa
AA seq
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MNYQLITTDAGLSQVCAQARATTQVALDTEFVRTRTYYPQLGLIQLYDGETLSLIDPLPI
EDWAPFKALLTDAKVTKFLHAGSEDLEVFLNAFGCVPSPFIDTQILAAFLGKPLSYGFAA
LVADYQQVTLDKSESRTDWMARPLSQKQCDYAAADVFYLLPMAKTLVEQIQATGWTEAAL
DECQLLCRRRQDILAPELAYREVGNAWQLRGRQLACLQRLADWRLRKARERDSAVNFVVR
EEHLWQVARHLPTSLGELDSLGLSGPEIRYHGKTLLSLVAETVDRNEADFPPPVANLLDY
PGYKSVFKEIKALIQATSASSGLSAELLASRRQINRLLNWYWKLSVGGNTPELVSGWRNT
LFGDDLRAILNRD
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcagttgatcactaccgatgccggcttatcacaggtttgcgcgcaggcgcgc
gctacaacgcaagtggcgctggacaccgaatttgtccggacgcgcacttattatccacag
ttgggactgattcaactgtatgacggtgaaacgctgtcgctgattgaccccctcccgatc
gaggactgggcgccgtttaaggccctgcttaccgacgccaaggtgaccaaatttctgcac
gccggcagcgaggacctggaggtcttcctgaacgcgttcggctgtgtgccgtcgccgttt
atcgacacgcaaattctggccgcttttttaggcaaaccgttgtcctatggctttgccgca
ctggtggcggactatcagcaggtgacgctggataaaagcgagtcccgcacagactggatg
gcgcgcccgctgagccaaaaacagtgcgactatgcggcggccgacgtcttctacctgctg
cccatggcaaaaacgctggtggagcaaattcaggcgacaggttggacggaggcggcgttg
gacgaatgtcagctgctgtgccgccgacgtcaggatattttggcgccggaactcgcttac
cgtgaggtcggcaacgcctggcagttgcgcggccgacagctggcgtgcctgcaacgtctg
gctgactggcgtctgcgtaaagcgcgcgaacgcgatagcgcggtgaatttcgtggtacgc
gaggagcacttgtggcaggtagcacgtcatttgccgacctcgctgggcgaattggattcg
ctggggctgagcggtccggaaattcgctatcatggtaaaacgttgctctcgctggtggcg
gagaccgtggatcggaatgaggctgacttcccgccgccggtcgcgaaccttctcgactac
cccggttacaagtcggtattcaaggagatcaaggcgctgattcaggcgaccagcgccagc
agcggactatctgcggaactgctagcctcgcgtcgtcagatcaaccgcctgctcaactgg
tactggaaactgtctgtcggtgggaatacgcctgaactggttagcggctggcgcaacacg
ctgttcggcgacgatctgcgggcgattttaaaccgcgattaa
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