KEGG   Lonsdalea britannica: CKQ53_14875
Entry
CKQ53_14875       CDS       T05623                                 
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
lbq  Lonsdalea britannica
Pathway
lbq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lbq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CKQ53_14875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lbq03400]
    CKQ53_14875
Enzymes [BR:lbq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CKQ53_14875
DNA repair and recombination proteins [BR:lbq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CKQ53_14875
    RecFOR pathway proteins
     CKQ53_14875
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 AAA_22 Mg_chelatase AAA_3 AAA_16 AAA_14 nSTAND3 Rad17 AAA_18 AAA_2 AAA_17 NTPase_1 Bac_DnaA RNA_helicase AAA_24 AAA_28 TsaE NB-ARC ABC_tran NPHP3_N
Other DBs
NCBI-ProteinID: AXW88124
UniProt: A0AAD0SHX2
LinkDB
Position
complement(3253666..3254670)
AA seq 334 aa
MIEADRLISPEVVTEEEVLDRAIRPKLLTEYVGQPKVREQMEIFIQAAKQRGDALDHLLI
FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAALLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGSLTSPLRDRFGIVQR
LEFYQVPDLQYIVSRSALCLGLEMTEEGALEVARRARGTPRIANRLLRRVRDFSEVKSNG
VIDGEIAIQALDMLAVDSEGFDYMDRKLLLAVIDKFMGGPVGLDNLAAAIGEERETIEDV
LEPFLIQQGFLQRTPRGRIATQHAYRHFGLTRQE
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgattgaagccgatcgtttaatctcccccgaggtcgtcaccgaagaagaagtgctggat
cgcgctatccgccccaagttgttgacggagtacgtcggccagcccaaggtgcgcgagcag
atggaaatcttcatacaggcggcgaaacagcgtggcgatgcgctggaccacctgttgatc
ttcggtcctcccggactgggcaaaaccacgttggccaatatcgtggcgaacgaaatgggg
gtgaacctgcgtaccacttcagggcctgtgcttgaaaaagcgggcgatctggccgcgctg
ttgaccaacctcgaaccccacgacgtcctttttatcgatgaaattcatcgcctgtcgccg
gtggtggaagaagtcctctatcctgcgatggaagactatcagctggatatcatgattggc
gaaggccccgcggcgcgttcgatcaagctggatctgccgccgtttacgctggtgggcgcc
acgacccgggcgggttctttgacctcgccgctgcgcgatcgcttcggcatcgtccagcgc
ctggagttttatcaggttccggatttgcagtatatcgtcagccgcagcgcgttgtgtctg
ggactggagatgacggaggaaggtgcgctggaggtggctcgccgcgcacgtggaacgccg
cgtatcgccaaccgcttgctgcgtcgtgtacgagacttttccgaagtgaagtcgaacggc
gtcattgacggtgaaatcgcgatccaggcattagatatgctggcggttgactctgaaggc
tttgattacatggaccgcaagctgctgctggcggtcatcgacaagtttatgggcggcccg
gtcgggctggataatctggcagctgcgattggcgaagagcgtgaaaccatcgaggatgtg
ctggagccgtttttgattcagcagggctttctgcaacgcacgccgcgcggacgcatcgcc
acccaacatgcctatcgccactttgggttgacgcgacaagagtaa

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