Lonsdalea britannica: CKQ53_14875
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Entry
CKQ53_14875 CDS
T05623
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
lbq
Lonsdalea britannica
Pathway
lbq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CKQ53_14875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbq03400
]
CKQ53_14875
Enzymes [BR:
lbq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CKQ53_14875
DNA repair and recombination proteins [BR:
lbq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CKQ53_14875
RecFOR pathway proteins
CKQ53_14875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_22
Mg_chelatase
AAA_3
AAA_16
AAA_14
nSTAND3
Rad17
AAA_18
AAA_2
AAA_17
NTPase_1
Bac_DnaA
RNA_helicase
AAA_24
AAA_28
TsaE
NB-ARC
ABC_tran
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AXW88124
UniProt:
A0AAD0SHX2
LinkDB
All DBs
Position
complement(3253666..3254670)
Genome browser
AA seq
334 aa
AA seq
DB search
MIEADRLISPEVVTEEEVLDRAIRPKLLTEYVGQPKVREQMEIFIQAAKQRGDALDHLLI
FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAALLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGSLTSPLRDRFGIVQR
LEFYQVPDLQYIVSRSALCLGLEMTEEGALEVARRARGTPRIANRLLRRVRDFSEVKSNG
VIDGEIAIQALDMLAVDSEGFDYMDRKLLLAVIDKFMGGPVGLDNLAAAIGEERETIEDV
LEPFLIQQGFLQRTPRGRIATQHAYRHFGLTRQE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagccgatcgtttaatctcccccgaggtcgtcaccgaagaagaagtgctggat
cgcgctatccgccccaagttgttgacggagtacgtcggccagcccaaggtgcgcgagcag
atggaaatcttcatacaggcggcgaaacagcgtggcgatgcgctggaccacctgttgatc
ttcggtcctcccggactgggcaaaaccacgttggccaatatcgtggcgaacgaaatgggg
gtgaacctgcgtaccacttcagggcctgtgcttgaaaaagcgggcgatctggccgcgctg
ttgaccaacctcgaaccccacgacgtcctttttatcgatgaaattcatcgcctgtcgccg
gtggtggaagaagtcctctatcctgcgatggaagactatcagctggatatcatgattggc
gaaggccccgcggcgcgttcgatcaagctggatctgccgccgtttacgctggtgggcgcc
acgacccgggcgggttctttgacctcgccgctgcgcgatcgcttcggcatcgtccagcgc
ctggagttttatcaggttccggatttgcagtatatcgtcagccgcagcgcgttgtgtctg
ggactggagatgacggaggaaggtgcgctggaggtggctcgccgcgcacgtggaacgccg
cgtatcgccaaccgcttgctgcgtcgtgtacgagacttttccgaagtgaagtcgaacggc
gtcattgacggtgaaatcgcgatccaggcattagatatgctggcggttgactctgaaggc
tttgattacatggaccgcaagctgctgctggcggtcatcgacaagtttatgggcggcccg
gtcgggctggataatctggcagctgcgattggcgaagagcgtgaaaccatcgaggatgtg
ctggagccgtttttgattcagcagggctttctgcaacgcacgccgcgcggacgcatcgcc
acccaacatgcctatcgccactttgggttgacgcgacaagagtaa
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