KEGG   Lonsdalea britannica: CKQ53_15125
Entry
CKQ53_15125       CDS       T05623                                 
Name
(GenBank) exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
lbq  Lonsdalea britannica
Pathway
lbq03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lbq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    CKQ53_15125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lbq03400]
    CKQ53_15125
Enzymes [BR:lbq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     CKQ53_15125
DNA repair and recombination proteins [BR:lbq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     CKQ53_15125
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CKQ53_15125
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CKQ53_15125
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: AXW88170
UniProt: A0AAD0SHY1
LinkDB
Position
3307949..3309424
AA seq 491 aa
MHAYPAGPRNRQRNSVSNKPSTPTFFIHDYETFGKHPARDRPAQFAGVRTDMDFNIIGEP
LVIYCQPTDDYLPEPEAVLITGITPQIAKSKGVNEAEFARQIHEAFSVPGTCILGYNNIR
FDDEVSRNIFYRNFYDPYAYSWKNGNSRWDLLDALRACYALRPEGIVWPENEDGLPSFRL
EHLTKANGVEHAHAHDAMSDVYATIAMAKRLKTAQPKLFDYLFQLRNKNKVNALIDIPNM
KPLMHVSGMFGAARGNTSWIVPLAWHPENRNAVIMCDLAGDITPLLELEPDELRTRLYTK
RDQLEAGQAPVPIKLVQINKCPVLAPASTLRPEDAARLGIDRQHCLDNLQRLRQHPLVRE
KAVALYADAPAFAAADDVDLQLYDGFFSEADRAAMTIIQETSPQNLPALDLKFADGRIAE
LLFRFRARNYPATLDDREQQRWLQHRKEVFTPARLETYLNNLHELYQLHQDDEKKAQLLK
SLFAYAQQVVG
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgcacgcgtatccggcgggtcctcgcaaccgacagagaaacagcgtgtccaacaaaccc
agcactccgacatttttcatccacgactatgagaccttcggcaagcatccggcccgggac
cgaccggcgcagttcgcaggcgtacgcaccgatatggacttcaatatcatcggtgaaccg
ctggtcatctactgtcagccgacggacgactatctgccggagccggaagcggttctgatc
accggtatcacgccgcaaatcgccaaaagcaaaggcgttaacgaggcggagttcgcccgt
caaatccacgaagcctttagcgtgccgggcacctgtatcttaggctacaacaacatccgt
ttcgatgatgaagtcagccgcaacattttttaccgtaacttctacgatccctacgcatac
agctggaaaaacggcaactcccgctgggacctgctggatgcgctccgcgcctgttacgcg
ctacgaccggaaggcatcgtctggccggaaaatgaagacggcctgcccagcttccgactg
gagcacctgactaaagcgaacggcgtcgaacacgcccacgcgcatgatgcgatgtccgac
gtttacgcgacgatcgcgatggctaaacggctgaaaaccgcgcagcccaagctgttcgac
tatctgtttcagctccgcaacaagaataaagtcaacgcgctgattgatatcccgaacatg
aaaccgctgatgcacgtgtccggcatgttcggcgcggcgcgcggtaacaccagctggatt
gtgccgctcgcctggcacccggaaaatcgcaacgcggtgatcatgtgcgacctggcgggc
gatatcacgccgctgctggagctggagcctgatgaactgcgcacgcggttgtacaccaag
cgcgaccaactggaagcaggtcaggcccccgttcccatcaagctggtgcagatcaacaag
tgtcccgtactcgcgcccgccagtacgttgcggccggaagacgcggcgcgcttggggatt
gaccgacagcactgtctcgataacctgcaacgtctgcgtcaacacccgctggtgcgggaa
aaagcggtagcgctgtacgccgacgcgcccgctttcgccgccgctgacgatgtggatctt
caactgtacgatggctttttcagcgaggcagaccgggcggcgatgaccattattcaggaa
acctcgccgcaaaacctgcccgcgctcgatctgaaattcgccgatggtcgtattgcagaa
ttgctcttccgctttcgggctcgcaattatccggccacgctggatgaccgcgagcagcag
cgctggttgcagcaccgcaaagaggtttttacaccggcgcgtctggagacctacctgaat
aacctccatgagctgtatcagctgcatcaggacgacgagaagaaggcccagttgctgaag
tcgctgtttgcctacgcccagcaggtggtgggctga

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