Lonsdalea britannica: CKQ53_15495
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Entry
CKQ53_15495 CDS
T05623
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
lbq
Lonsdalea britannica
Brite
KEGG Orthology (KO) [BR:
lbq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbq03009
]
CKQ53_15495
Enzymes [BR:
lbq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CKQ53_15495
Ribosome biogenesis [BR:
lbq03009
]
Prokaryotic type
ribosomal protein modification factors
CKQ53_15495
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
CLP1_P
TRAM
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
AXW88881
UniProt:
A0AAD0WMF3
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All DBs
Position
3391219..3392562
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AA seq
447 aa
AA seq
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MTQQKNGGDKPQGNKIGFVSLGCPKNLVDSERILTELRTEGYQVVPSYHDADLVIVNTCG
FIDSAVQESLETIGEALNENGKVIVTGCLGAKENQIREVHPNVLEISGPHSYEQVLSHVH
HYVPQPAHNPFTSLVPESGVKLTPRHYAYLKISEGCDHRCTFCIIPSMRGKLDSRPVGSV
LDEAKRLADAGVKELLVISQDTSAYGTDIKHRTGFWNGQPVKSSMVSLCEQLATLGIWVR
LHYVYPYPHVDEVIPLMAEGKILPYLDIPLQHASPKVLKLMKRPGAVERTLERIKRWREI
CPALTLRSTFIVGFPGETEEDFQMLLDFLKEAQLDRVGCFKFSPVEGATANTLPDPVPEE
IKEERYHRFMQLQQQISTQRLQAKIGLELPVLIDEVDEEGAIGRSMADAPEIDGAVYLNG
ETRLKPGDLVTVKIEHADEYDLWGSRV
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
ctgacccagcaaaagaacggcggcgacaagccgcagggcaataaaatcggttttgtcagc
ctgggctgccccaaaaacctggtggactccgagcgcatcctcacggagctgcgcaccgaa
gggtatcaggtggtgccaagctatcacgacgccgacctggtgatcgtcaacacctgcggc
tttatcgacagcgccgtgcaggagtcgttggaaaccatcggcgaagcgctgaatgaaaac
ggcaaggtcatcgtcaccggctgtctcggcgctaaagagaatcaaattcgcgaagtgcat
cccaacgtgttggaaatcagcgggccgcacagctacgagcaggtgctgtcccacgtccat
cactatgtcccgcagcccgcgcacaacccattcaccagcctggtgccggagtccggcgtg
aagctgacgccgagacactacgcctacctgaagatttcggaaggctgcgaccatcgctgc
accttctgcatcatcccctccatgcgcggcaaactggacagccgccctgttggctccgtc
ctggatgaggctaaacgtctggccgacgccggagtgaaagagctgctggtgatctcgcag
gatacctccgcctacggcaccgacatcaaacaccgcaccggcttctggaacggccagccg
gtcaagtccagcatggtcagcctgtgcgaacagctggcgacgctggggatttgggtccgc
ctgcactacgtctacccttacccgcacgtcgacgaggttatcccgttgatggcagaaggc
aaaatcctgccgtatctggatatcccgctacagcacgccagcccgaaagtgttgaagctg
atgaaacgccccggcgcggtcgaacgcacgctggagcgcattaaacgctggcgtgagatc
tgcccggcgctgacgctgcgctcaaccttcatcgtcggcttccccggcgaaacggaggaa
gacttccagatgttgttggatttcctgaaagaagcgcagctggatcgcgtgggctgcttc
aagttcagcccggtggaaggtgctaccgccaatacgctacccgatccggtgccggaggag
atcaaggaggagcgctatcaccgcttcatgcagctgcaacagcagatttccacacagcgc
ctgcaggcgaaaatcggcctggagctgccggtactgatcgatgaagtcgatgaagaaggc
gctatcggtcgtagcatggccgacgccccggaaatcgacggcgcggtctatctgaacggc
gaaactcgcctcaagccgggcgatctcgtcaccgtaaaaatcgaacacgctgacgaatac
gatctgtggggcagccgggtctga
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