Levilactobacillus brevis ATCC 367: LVIS_1042
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Entry
LVIS_1042 CDS
T00406
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lbr
Levilactobacillus brevis ATCC 367
Pathway
lbr03030
DNA replication
lbr03410
Base excision repair
lbr03420
Nucleotide excision repair
lbr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LVIS_1042
03410 Base excision repair
LVIS_1042
03420 Nucleotide excision repair
LVIS_1042
03440 Homologous recombination
LVIS_1042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbr03032
]
LVIS_1042
03400 DNA repair and recombination proteins [BR:
lbr03400
]
LVIS_1042
Enzymes [BR:
lbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LVIS_1042
DNA replication proteins [BR:
lbr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LVIS_1042
DNA repair and recombination proteins [BR:
lbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LVIS_1042
NER (nucleotide excision repair)
GGR (global genome repair) factors
LVIS_1042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ABJ64175
UniProt:
Q03RJ7
LinkDB
All DBs
Position
complement(1053671..1056331)
Genome browser
AA seq
886 aa
AA seq
DB search
MAEKRLLLIDGNSVTFKAFFALYTALGKFTNSEGLHTNAIYGFNTMLETMLKVVQPTHAL
VAFDAGKTTFRTKMYDNYKGGRAKTAPELSEQFPYVKELLAARGIQTYELANYEADDIIG
TLAKQAEEQGFTTTIVTGDRDLTQLADDHTTVSISKKGVSEIEHYTPAYVKEKMGVTPAQ
IIDIKGLQGDNSDNYPGVTGVGPKRAVELVSTYGSIDGIYDHLADITAKKLKEHLIADHD
QALLAKQLATIKRDAPVEKTVSELVYKGDDYDQLVPFYQKMNFNQFLSKMSIDGEAPTAT
PGLEEVTYTVLTADNVTELPSFTDGCEFYLEMLDDNYHTAELAGFVIGHNDQWWVSRDTA
LLQQAPLKGLLENADIAKQVFDAKRTFVALQRLAVTLTGVDCDLLLGSYLLNTYDNSNDL
GRLAMEHGYHQVATDEDVYGKGAKAAIPDDDDVFFSHLARKARAIEQLRPQIFKDLADNE
QTDLYRDIELPMAFVLARMEVAGITVEASELEAMGSKFTEQLAEIEQTIYNEAGEEFNIG
SPKQLGHILFEKMGLPVIKKTKTGYSTAVGVLEKLAAEAPIAENILKYRKIAKIQSTYVE
GLLKVIHPDDQKVHTRYLQTLTQTGRLSSVDPNLQNIPVRNEEGRAIRKAFVPSHPDWEI
FSSDYSQIELRVLAHMSHDKQMQEAFREGQDIHAATARRIFKMGPDEEVTPNIRRQAKAV
NFGIVYGISDFGLSQNIGISRKQAKAFIDTYFEEYPGVKAYTERMVQQAHELGYVETIAH
RRRYLPDINSRNFNQRSFAERTAMNTPIQGSAADIIKIAMIRMEQALKDMQATMLLQVHD
ELIFEAPASEIDTLAKLVPSVMDSAIELEIPLKVESHYGPTWYDAK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaaacgtttattattgattgatggaaacagtgtgacttttaaggcctttttc
gcgttatataccgcattgggaaagtttaccaatagcgaaggactgcatacgaacgctatt
tatgggttcaataccatgttggaaacgatgttaaaggtggtacaaccaacccatgcttta
gtggcttttgatgctggtaaaacaacttttcggactaaaatgtatgacaattataaaggt
ggccgggcaaagacggcaccggaactttccgaacaatttccgtacgtgaaagagcttttg
gcggcacgtgggattcaaacttatgagttagccaattatgaagctgatgatatcatcggt
accttggctaaacaggcggaggaacagggatttaccacgactattgtgacgggtgaccgg
gatttgacccagttggctgatgatcatacgacagtttcaatttctaaaaaaggggttagc
gaaattgaacactacacgcccgcctatgtaaaagaaaaaatgggggttacgccggctcag
attattgatattaagggccttcaaggcgacaattccgataattatcccggagtgacaggg
gttgggcctaagcgagcagttgaattggttagcacctacggcagtatcgatggtatctac
gatcatttggctgacatcacagctaagaaattaaaagagcatttgattgcagatcacgac
caagcgctgctagctaaacaattagcgaccatcaagcgcgatgcaccagtcgaaaaaaca
gtttctgaattggtttacaagggtgacgactatgatcaactggtgccgttttatcaaaag
atgaactttaatcaatttctaagtaagatgagcattgatggtgaggctcccacggcaaca
ccagggttagaagaagtcacttatactgttttgacggcagacaatgtgactgaattgcca
tcttttaccgatggctgtgaattttatctagagatgcttgatgacaattatcatacagct
gagttagctggttttgtgattgggcataacgatcaatggtgggtgagtcgcgacacggcc
ctccttcagcaagcccccttaaaaggcttattggaaaatgcggacattgccaaacaagtc
tttgatgcgaaacgaacttttgttgcgttgcaacgcttagccgtgactttaacgggtgtg
gattgtgatttgttgctggggtcatacttgttaaatacgtatgacaacagcaatgattta
ggtcgacttgccatggaacacgggtaccatcaggtcgcaaccgacgaagatgtttatggt
aaaggcgccaaggcggcaatcccagatgatgatgacgtgttctttagtcatttagcccgt
aaagcccgggccatcgaacaacttcgaccacagatttttaaagatcttgctgacaatgag
caaacagatctttaccgtgatattgagttgccaatggcatttgtgttggcacgaatggaa
gtagctggtattacggttgaggccagtgaattagaggctatgggcagcaagttcaccgaa
cagttggcggagatcgaacagactatttataacgaggcgggcgaagagtttaacattggt
tcacccaagcaattaggccatattttatttgaaaagatgggtctacccgtaatcaagaag
acaaagaccgggtactcaacggcagtaggggtgcttgagaagttagctgctgaagcaccg
attgctgagaatatcttgaagtatcgtaagattgccaagattcagtcgacctacgttgaa
ggcttattgaaggtcattcatccggacgaccaaaaagtgcatacacgttatttgcagacg
ttaactcaaaccggtcgattatcttcggttgatccaaacttgcaaaatattccggtccgt
aacgaagaaggacgagcgattcgtaaagcctttgtaccaagtcatccagactgggaaatc
ttttcatctgactactcacaaattgaactgcgtgtgttggctcatatgagtcatgataag
caaatgcaagaagcctttcgtgagggacaggatattcatgcggcgacggcgcgacgaatt
ttcaagatggggcctgacgaagaagttaccccgaatatccggcgacaagccaaggcggtt
aactttggtattgtatatggaatcagtgactttggcttgtcacaaaatatcggcatttct
cgcaaacaggctaaggcttttatcgatacgtactttgaggagtatccgggggttaaggcc
tacacagagcggatggtccaacaggctcatgaattgggatatgtcgaaacgattgctcat
cggcggcggtatttgccagacatcaactcacgtaatttcaatcagcggtcatttgctgag
cggacagcgatgaatacaccaattcaggggagcgcggcagatattatcaaaattgccatg
attcgaatggaacaggcactaaaggacatgcaggccacaatgctactgcaggttcatgat
gaactgatctttgaagcccccgcaagtgagattgacaccttggcaaagctggttccgagt
gtgatggattcggccattgagctagaaattccgttgaaagttgagagtcactatggacca
acttggtatgatgccaagtaa
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