Levilactobacillus brevis ATCC 367: LVIS_1224
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Entry
LVIS_1224 CDS
T00406
Name
(GenBank) Superfamily II DNA and RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lbr
Levilactobacillus brevis ATCC 367
Brite
KEGG Orthology (KO) [BR:
lbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbr03019
]
LVIS_1224
03009 Ribosome biogenesis [BR:
lbr03009
]
LVIS_1224
Enzymes [BR:
lbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LVIS_1224
Messenger RNA biogenesis [BR:
lbr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LVIS_1224
Ribosome biogenesis [BR:
lbr03009
]
Prokaryotic type
rRNA helicases
LVIS_1224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABJ64330
UniProt:
Q03R42
LinkDB
All DBs
Position
complement(1194688..1196046)
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AA seq
452 aa
AA seq
DB search
MTADFKNFNLQPYLMTALQKIGFQQPTAVQEKLIPVISAGHDVVGQSQTGSGKTHTFLLP
IFNQLTSENQVQAVITTPSRELAYQIRTAAEQLAAEAPFEIRIGNYVGGTDKQRQIEKLR
HYQPQLVIGTPGRVQDLIQSQALDVHTTRQFVVDEADMTLDLGFLDQVDKIAGRMPKNLQ
MMVFSATIPQRLDPFLRKYMNHPVVEEIPTATVISSTIDNWLISTKGQNKNQLIYQLITM
GEPYLVLIFANTKTRVEQIHDFLQSQGLKVAMIHGGIKPRERKRVMREVKNLQFQFVVAT
DLAARGIDIEGVSHVINDDIPEDLDFFVHRVGRTGRQGMPGTAITLYSPDEEAKIAEIEA
MGIKFQPKRISNGEIVDSYDRNRRQKRVKSTEKLDPTLIGLVKKKKKKIKPGYKHQIKQA
IHRKKDQERRIAQRQSARSERKRRKRESDRYQ
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagattttaaaaattttaacttgcagccgtatctgatgacggcgctacaaaag
attgggtttcaacagccaaccgctgttcaggaaaaactaatcccagtaattagtgctggc
cacgatgtcgttggtcagtcacaaaccgggagtggtaagacccatacgttcttgctaccc
atctttaatcaattgacttctgagaaccaagtacaagccgtaattaccacgccaagccgt
gaactggcttaccagattcgtacggcggcggaacaattggcggcggaagccccctttgaa
attcgcattggaaactacgttggtggaacggataaacaacgacaaattgaaaagctgcgg
cattaccaaccgcaactggtgattggaacgcccggtcgggtgcaagatttgattcaatca
caggcgttggacgtgcatacgactcgtcagtttgtggtcgatgaagccgatatgactttg
gatctgggtttcttagatcaagtggacaaaatcgctggtagaatgccgaaaaacctgcaa
atgatggtcttttcagccacaattccccaacggttagatccgtttttgcgtaaatatatg
aatcatccggttgttgaagaaattccaacggcaactgtgattagttctacaattgataat
tggttgatttcaaccaagggtcaaaacaagaaccaattaatttatcaattaattacgatg
ggggaaccctatctggttttaatcttcgcgaatacgaagacccgggttgaacagattcat
gactttttgcaatcgcaagggctaaaggttgccatgattcatggggggattaagccgcgt
gaacgtaaacgggtcatgcgtgaagtgaagaatcttcaattccaattcgttgtcgcaacg
gatctggcggcacggggtattgatattgaaggtgtttcacacgtcattaatgatgatatt
cctgaagatttggatttctttgttcaccgggttggccggacggggcggcaaggtatgcca
ggaacggcgattaccttgtattcaccagatgaagaagccaagattgccgagattgaagcc
atggggattaagttccaacctaaacgaatcagtaatggtgaaattgtggattcctatgac
cgaaatcggcggcaaaaacgggttaagagtacggaaaagctagatccaactctgattggt
ttagtcaagaagaagaagaaaaagatcaagccagggtataagcatcagatcaagcaagca
attcaccgcaagaaagatcaggaacggcggattgcgcaacggcagagtgcgcgaagtgaa
cggaaacggcgtaagcgtgaatccgatcgttatcaataa
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