Levilactobacillus brevis ATCC 367: LVIS_1377
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Entry
LVIS_1377 CDS
T00406
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lbr
Levilactobacillus brevis ATCC 367
Pathway
lbr03410
Base excision repair
lbr03430
Mismatch repair
lbr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LVIS_1377
03430 Mismatch repair
LVIS_1377
03440 Homologous recombination
LVIS_1377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbr03400
]
LVIS_1377
DNA repair and recombination proteins [BR:
lbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LVIS_1377
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LVIS_1377
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LVIS_1377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
DHH
RecJ_OB
DHHA1
Peripla_BP_4
NQRA_2nd
Motif
Other DBs
NCBI-ProteinID:
ABJ64475
UniProt:
Q03QP7
LinkDB
All DBs
Position
complement(1345211..1347532)
Genome browser
AA seq
773 aa
AA seq
DB search
MIAAHYHWNIKHVDRPSAEVQALATAADISPIVAQILWNRGYQTAPAAHDFLNPGPEQLH
DPSLLNDMDKGIERIETAIGEEQQITIYGDYDADGVTSTAILYETLNEMGAKVNYYIPNR
FSDGYGPNVAAFEKLIAAGTQLFVTVDNGVAGNEAIAAAKKAGVDVVVTDHHELPEELPD
AYAIIHPRYPGAEYPFGGLSGAGVAFKVAQALREEIPQDLLDLAAIGTVADLVPLVDENR
VLVYFGLQLLKQDERPGLLALMQTAGIKSDDLTEQSIGFGIAPRLNALGRLDDASPAVEL
LTTVDEAKAEELAKMTEQKNRQRQELVQSISTAALQQAVDADHQDRATLVISGHDWHEGV
LGIVASKVVEATGKPTLVLNIQAGRAKGSGRSVEAFNLFAALDGHRDLMTAFGGHHMAVG
LTVPEDQLTALADALDDEAQTQALAQSGPSELPVAATLPVAAVTPSLYQELAQLAPFGTD
NLQPLFAFESATVTQVKVIGKDHSHLKFQLQEGQHQLNAIQFGAAKYVDDLTAAPDDAAV
LGTIEDNVWQGRHSLQVMVKDLKTSVTPVQDQRTTTLHAQMFTTVGVYVFFHRNIYQQLR
SQLPEQATAILVDGTTQAPVTAEQRVFIVDCPDMTVDLTNVLQQLRPTQLTVYLYKKESL
SQLGMPTRAQYAKLFKFVATHQQVDVGHQLAQLATFLQIPKTQLVFMIQVFFECGFITIA
HGMMNGVANPAHKELTTAPSYQLRQQQMQTEAELLQCPTAALLQRLHAPFEQK
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
gtgattgctgcacactatcattggaatattaaacacgttgaccggccgtcagctgaagtt
caggccttggcaactgcggcggacatttcgcctatcgtggcccaaattttgtggaatcgg
ggataccagacggcaccagctgcacatgattttttaaatccggggccggagcaattgcat
gatccttccttgttgaatgatatggataaaggcattgagcggattgagactgcaattggt
gaagaacaacagattacaatttatggtgattatgatgcggatggtgttaccagtaccgcg
attctatatgaaacgctcaatgagatgggggctaaggttaattactatattcctaatcgc
ttcagtgacggttatggaccgaacgtcgcggcatttgaaaaactaattgcggccggcaca
cagttatttgtgacggtggacaatggggtcgccggtaatgaggccattgcagcggccaaa
aaagctggggttgacgtggtggttaccgatcaccatgagctgccagaagaattaccggat
gcttacgcgattattcacccccggtatcccggagctgaatatccatttggtggcttgtcc
ggagccggggtcgcctttaaggtggcacaggcgttacgagaagaaattccccaagaccta
ttggatttggcggcaatcggaacggtggcggacttagtgccattggtggacgagaatcgc
gtgctggtttattttggcttacaactacttaaacaagatgagcggccgggcttactggcc
ttaatgcaaacagctggaattaaatccgatgacttgacggaacagtctatcggatttggg
atcgcaccacggctgaatgcacttggacggttagatgatgccagcccggcggtagagtta
ttgacaaccgtcgatgaagctaaggcagaagaattggccaagatgacggagcagaagaat
cgtcaacgccaagagctcgtccagtcgattagcaccgcggctttacaacaagcagtggat
gcagatcaccaagaccgggccacgcttgtcattagtggtcatgattggcatgagggcgta
ttgggaattgtagccagcaaagtggttgaggcaacgggaaaaccgaccttggttctgaac
attcaagcaggtcgtgccaaagggtctggtcgaagtgtggaagcctttaacttatttgcg
gccttagatggtcatagagacctgatgacggcctttggtggtcatcacatggccgttggc
ttaacggtccctgaagaccaattgacagccttagccgatgcgttagatgatgaggctcaa
acgcaagcgctcgctcaaagtggtcctagcgaactgccggtagccgcgacgttaccggtt
gcggccgttacgccatccttatatcaggagttggcgcagctggcaccgtttgggacggat
aatctacagccgctatttgcttttgaatcggcgacggttactcaagttaaggtgattggt
aaagaccatagtcatttgaaatttcagttacaagaaggacaacaccaattgaatgccatt
caatttggcgcggcaaagtacgttgatgatcttaccgcagcaccagatgatgcggctgtt
ttggggacgattgaggataatgtttggcagggtcgccattcattgcaggtaatggtcaaa
gacctcaaaacgagtgtaacgcccgttcaagatcaacgaacaacgacgttgcatgcccaa
atgtttacgacagtgggtgtctacgttttctttcaccgcaatatctatcaacaattgcgg
tcacaactgccggagcaggccacggcaatcctagttgatgggacgacgcaggcaccagta
acggctgaacagcgggtatttatcgttgattgcccggatatgacagtcgacttaacgaac
gtgctacagcaattacgaccaactcagctgacggtttatctctataagaaagaaagtctt
tcgcaattagggatgccaactcgcgcccagtatgctaaactatttaagttcgttgcaacc
catcaacaagttgatgtggggcatcaactggcccaattggcgacctttttacaaataccg
aaaacccagttggtattcatgattcaagtgttcttcgagtgtggctttatcacaatcgca
catggaatgatgaacggtgtggcaaacccggcgcataaagagttaacgacggcaccgagt
taccaattacgacaacaacaaatgcaaacggaagcagaactcttgcagtgtccaaccgcg
gctttgttgcaacgtctacatgccccatttgaacaaaaataa
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