Levilactobacillus brevis ATCC 367: LVIS_1751
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Entry
LVIS_1751 CDS
T00406
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lbr
Levilactobacillus brevis ATCC 367
Pathway
lbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LVIS_1751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbr03019
]
LVIS_1751
03400 DNA repair and recombination proteins [BR:
lbr03400
]
LVIS_1751
Enzymes [BR:
lbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LVIS_1751
Messenger RNA biogenesis [BR:
lbr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LVIS_1751
DNA repair and recombination proteins [BR:
lbr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LVIS_1751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
ABJ64818
UniProt:
Q03PQ4
LinkDB
All DBs
Position
complement(1705376..1707151)
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AA seq
591 aa
AA seq
DB search
MDLAAAQQVLKTVFGYDEFRPGQKAVIEHVLAGDSSLAIMPTGGGKSLCYQIPAMLFSGI
TVVVSPLISLMKDQVDALNDSGIPATFINSSVDWPEIQQRLAALHNGDYKLVYIAPERLD
SEAFVQALARLPIDLLAVDEAHCISQWGHDFRPSYLTLSHAIEQLPSQPQVLALTATATT
QVAHDICQQLWIDPQNEVNTGFARDNLNLTVVKDQDTDRYILDYLQVNQGETGIIYASTR
KEVERLTKLLTKQHVTAAAYHAGLSDEQRQQNQEDFLYDRIQVMVATNAFGMGIDKSNVR
FVIHAQVPGTLEAYYQEAGRAGRDGLPSEAILVYHAQDLQIQRFFIDQSGMDEEHRQRAY
QKLQVMNHYANTEGCLQQFILQYFGEVSPACGRCSNCLDERESQDVTTAAQQVLSCVVRL
RSRFGKGVVAQVLTGARNQRIRDNNLTMLPTYGLMANQKQKTVGELIDFLTAAGYLQSVG
GQYPTLQVTASGVAVLKGQEQAYRKMAQRVKRLVPEDTALFGKLRDLRRELAEEQHVPPF
VIFSDKALHAMCEALPTDDDSFLAVKGVGQSKLDRYGEAFMAVIRENQDMD
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggatttggcggcagcacaacaggtgttaaaaacagtcttcggatacgacgagtttcga
ccaggtcaaaaggccgtcattgaacacgtgctggcgggcgatagtagcttggcgattatg
ccaacgggcgggggaaaatcactttgctatcaaataccggccatgttattttctggtatc
acggtggtggtatccccactcatctcattaatgaaagatcaggttgatgcgctaaatgat
agtgggattccagcaaccttcattaacagttcggtggactggccggaaattcaacaacgg
ttagcagcactgcacaatggggactacaaattggtgtatattgcgccagaacggttagat
tcagaagcctttgttcaagcattggcccggttgccaattgatctgttggcggttgatgag
gcccactgtatttcccaatggggccacgattttcgaccgagctatttgacgttgagtcat
gccattgaacagttaccaagtcagccacaggtgttggcactgacggcgacggcaaccacc
caagttgctcatgatatctgtcagcagttatggattgatccgcaaaatgaagtgaatact
ggatttgctcgggataatttgaatctaacggtcgtcaaggatcaagatacggatcgctat
attttggattatttgcaagtcaatcaaggggagacgggcattatttacgctagtacccgt
aaggaagtcgaacgactgacaaaattacttacgaaacagcacgtcactgcagcggcctat
cacgcgggcttgagtgacgaacagcgacagcaaaatcaagaagatttcttatatgatcgg
attcaggtcatggtggcgacgaatgcgtttggaatgggtattgataagagtaatgtccgg
tttgtgatccatgcgcaggtaccgggaacattagaggcctactatcaagaagccgggcga
gcaggtcgagatgggttgccgagtgaagcaatcttggtctatcacgctcaggacttacag
attcaacggtttttcattgatcaatcgggaatggacgaagagcatcggcaacgtgcctat
caaaagctacaggtgatgaatcattatgcgaatacggaggggtgtttgcagcagtttatt
ctccaatattttggggaagtatcaccggcgtgtggtcggtgtagtaattgcttggacgaa
cgggaatcccaagatgttacgacagcggctcaacaggtgttgtcgtgtgtggtgcggttg
cgatcacgatttggtaagggcgtggtcgcgcaggtgttgaccggggcacgaaatcaacgg
atccgtgacaacaatctgacgatgctgccaacttatggtttgatggccaatcaaaagcaa
aagaccgtgggtgaactcattgactttttaacggcagctggttatttgcagagcgtgggt
ggtcaatacccgacattgcaggtgacggctagtggtgtcgctgtgctaaaggggcaagaa
caggcttaccgcaagatggcgcaacgggtgaagcgattggtaccggaagatacggcgttg
tttggcaagctacgcgacttgcggcgtgaattggcagaggagcagcatgtgccaccattt
gtgattttttcggataaggccttacacgcgatgtgtgaagccttgccaacagacgatgat
agctttcttgcagtgaaaggtgtcggacagagtaagctggaccggtatggggaagcattt
atggcggtgattcgagagaatcaagatatggactaa
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