Lactiplantibacillus brownii: MH1LPH_04080
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Entry
MH1LPH_04080 CDS
T10750
Symbol
rhe1
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lbs Lactiplantibacillus brownii
Pathway
lbs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MH1LPH_04080 (rhe1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbs03019
]
MH1LPH_04080 (rhe1)
03009 Ribosome biogenesis [BR:
lbs03009
]
MH1LPH_04080 (rhe1)
Enzymes [BR:
lbs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MH1LPH_04080 (rhe1)
Messenger RNA biogenesis [BR:
lbs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MH1LPH_04080 (rhe1)
Ribosome biogenesis [BR:
lbs03009
]
Prokaryotic type
rRNA helicases
MH1LPH_04080 (rhe1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
BDZ29942
LinkDB
All DBs
Position
503665..505299
Genome browser
AA seq
544 aa
AA seq
DB search
MKFTELGLSDSLLKAVNRAGYEEATPIQAETIPMVLNGEDVIGQAQTGTGKTAAFALPIL
QRLDFDNHHIQALVISPTRELAIQTQEEIFRLGKDERAKVQVVYGGSDIRRQIRNLKQNP
QVIVGTPGRLLDHIRRGTVKLDHVKMLVLDEADEMLDMGFLDDIESIIKQVPSERQTMLF
SATMPPEIKRIGVQFMHEPHHVKIKAKELTADTVDQYYVKAKEYEKFDIMTRLFDVQAPE
LTIVFGRTKRRVDELSKGLEARGYNAAGIHGDLSQQRRTQIMRQFKAGKLDILVATDVAA
RGLDVSGVTHVYNYDIPQDPDSYVHRIGRTGRAGHKGVSLTFVTPNEMEYLRVIEKLTKK
RMLPLKPPTDAEAFAGQIAAAEADVDTLVAKTKTEKYADQAAELLQKYDATDLVAALLND
LTKDDANAVPVKITPERPLPRHKGGGGNRRGGGGYRGGNRNRNRSSNSHGGGSGRGGYSH
NGRSRDRDDHRSSDHRGGGERRGNDRKSNGYKSRSREDNRSNNRNHDEGRKQSSKRNFTI
RTND
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
ttgaagtttacagaactaggcttatccgatagcctacttaaagcagttaaccgagcaggc
tacgaagaagccaccccaatccaagcagaaaccattccaatggtgctgaacggggaagac
gtgattggccaagcacaaaccggtactggtaaaaccgccgcgtttgcattgccaatccta
caacgtttggattttgataatcatcatatccaagcattggtcatttcaccaacgcgtgaa
ttggccatccaaactcaggaagaaatcttccgtttgggtaaagacgaacgggcgaaagtc
caagttgtctacggcggttctgacatccgtcgtcaaatcagaaacctgaagcaaaaccca
caagtgattgttgggacgccaggtcgtttactagatcatattcgtcgcggcacggtcaaa
ttagaccatgttaagatgttggtcttagatgaagccgatgaaatgttagacatgggattc
ttggatgatattgaatcaattatcaaacaagttccttcagaacggcaaacgatgcttttc
tcagcaacgatgcctcctgaaatcaaacgcatcggtgttcagttcatgcatgaaccacac
catgtaaaaattaaagctaaagaattgactgccgatacggttgatcaatattacgttaaa
gctaaagaatatgaaaagtttgatatcatgacgcgtttattcgatgttcaggcacctgaa
ttgacgatcgtgtttggtcggacgaagcgtcgcgttgacgaattgtcaaaaggccttgaa
gctcgtggctacaatgctgctgggattcatggtgacttgagtcaacaacgtcggacgcaa
atcatgcgtcaattcaaagctggtaaattggatatcttagtggcaaccgatgtggctgct
cggggacttgatgtttctggtgtaacccacgtttacaattacgatattccacaggaccca
gatagttatgttcatcggattggccgtactggtcgtgccggacacaaaggggtttcattg
accttcgtgacaccgaacgaaatggaatacttgcgggtcattgaaaagttgaccaagaag
cgcatgttaccattgaagccaccaacagatgctgaagcttttgccggccaaattgccgct
gcggaagctgatgtggatacgttggttgctaagaccaagactgaaaagtatgcggatcaa
gctgcagaattattgcaaaaatatgatgcaactgatttggttgcggcattgcttaacgat
ttaactaaggacgacgctaacgccgtaccagttaagatcacgccagaacgtccattacct
cgtcacaagggtggcggcggcaatcgtcgtggcggtggtggttatcgtggtggtaaccgc
aatcgtaatcgtagcagtaacagtcatggtggcggtagcggccgtggtggttattcgcac
aatggtcgtagccgtgaccgtgatgatcatcgtagtagtgaccatcgtggcggtggcgaa
cgccgtggtaatgatcgcaagagcaatggttacaagagccgcagtcgtgaagacaaccgc
agcaacaaccgtaaccatgatgaaggccgtaagcaaagtagcaaacggaacttcaccatc
cgcacgaacgattaa
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