KEGG   Lactiplantibacillus brownii: MH1LPH_08240
Entry
MH1LPH_08240      CDS       T10750                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
lbs  Lactiplantibacillus brownii
Pathway
lbs03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lbs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MH1LPH_08240 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lbs03021]
    MH1LPH_08240 (rpoC)
   03400 DNA repair and recombination proteins [BR:lbs03400]
    MH1LPH_08240 (rpoC)
Enzymes [BR:lbs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     MH1LPH_08240 (rpoC)
Transcription machinery [BR:lbs03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     MH1LPH_08240 (rpoC)
DNA repair and recombination proteins [BR:lbs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      MH1LPH_08240 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Apocytochr_F_C
Other DBs
NCBI-ProteinID: BDZ30358
LinkDB
Position
961575..965216
AA seq 1213 aa
MIDVNKFESMQIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFDERIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGIPSRMGLVLDM
SPRALEEIIYFASYVVIEPGNTPLEKKQLLSEREYREKKAQYGKEFDAEMGAEAIKRLLN
NVDLEKEARDLKEALKDASGQKRTRAVRRLDIIEAFVTSGNEPAWMVMDAIPVIPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVAGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIDVGPFLKMNQMGLPRQ
MALELFKPFIMKELVKRELASNIKNAKRKIERADDDVWGVLEDVIKEHPVLLNRAPTLHR
LGIQAFEPVLVSGKAMRLHPLACEAYNADFDGDQMAIHLPLSDEAQAEARLLMLAAHHIL
APKDGKPVVTPSQDMVIGNYYLTTEEVGREGEGMIFKDLNEAQKAYQAGYVHMHSRVGVQ
ASSMPDKPFTDEEKQEVLVTTVGKAIFNNILPGKFPYLNEPTNDNLIDGTPDKYFLKPGE
NIHDFLDGQELIMPFKKGFLADIIAEVYKQYHVTATSLLLDRMKDLGYNISTKSGLTVGV
ADITDLKEKPAIIDEAHKQVNTISKQFRRGLITDDERYERVIGVWNDAKDQIQQKLIESF
SPDNPIYMMSDSGARGNISNFTQLAGMRGLMAAPNGKIMELPILSNFREGLSVLEMFIST
HGARKGMTDTALKTANSGYLTRRLVDVAQDVIVREKDCGTDRGLRISAIMEGNEVIEPLY
DRILGRYTMKTIFDPETHEEIIGNNVMIDEDLAQKIVDAGVTEVTIRSAFTCNTKHGVCE
HCYGRNMATGDEVEVGEAVGTVAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVQEIV
ESRNPKGRAEITEVTGTVESIEENPAERTKEVTVKGETDTRTYTLPLTARMAVSEGDFIH
RGAALNVGSIDPKQLIQVRDVLSTENYLLREVQRVYRMQGVEIGDKHVEIMIRQMLRKVR
IMDPGDTDVLPGTLMDIADFKDENYKTLIAGGIPATSRPVILGITKAALETNSFLSAASF
QETTRVLTDAAIRGKNDPLIGLKENVIIGKIIPAGTGMPIYRHIKPKEVGNVADGVYSIS
DLEKQMQEQDASK
NT seq 3642 nt   +upstreamnt  +downstreamnt
ttgatcgatgtcaacaagtttgaaagcatgcaaatcggtctggcatccccagacaagatt
cgcagctggtcatatggcgaagtcaaaaagcctgaaaccattaactaccggacattgaaa
cctgaaaaagacggtctgtttgatgaacgtatcttcggtcctactaaggattgggaatgt
gcgtgtggtaaatacaaacggatccgttataagggtatcgtctgtgaccgttgtggtgtc
gaagttacccgtagtaaagtccgtcgtgaacggatggggcatatcgaactcgccgcacca
gttactcacatctggtattttaagggtattcctagccggatgggcttagtcttagacatg
agcccacgggcacttgaagaaatcatttacttcgcttcatacgtcgttatcgaacctggt
aacacgccacttgaaaagaagcaattgctttcagaacgtgaataccgtgaaaagaaagcc
caatacggcaaagaatttgatgctgaaatgggtgccgaagccatcaagcgcttattgaat
aacgtggatcttgaaaaagaagcacgtgatttaaaggaagccttgaaggatgcgtctggt
caaaagcggacgcgggccgttcgccgtttggatatcatcgaagctttcgtgacttctggt
aacgaaccagcttggatggtaatggacgcgattccggtcattcccccggacttacgacca
atggttcaattggaaggtgggcgttttgccacttctgacttgaatgatttgtatcgtcgt
gttatcaaccgtaacaaccggttgaagcgtttgttggacttaaacgcccctgggattatc
gttcaaaacgaaaagcggatgttacaagaagccgttgatgcgttgatcgataatggtcgt
cgtggccgtccagtcgctggtcccggtaatcgtcctttgaagtctctttcacatatgttg
aaagggaagcaaggtcggttccgtcaaaacttacttggtaagcgggttgactattctggt
cgttccgttatcgatgttggtccattcttgaagatgaatcaaatggggttacctcgtcaa
atggcgttggaactcttcaagccattcatcatgaaagaattggttaaacgtgaattagct
tctaatattaagaacgctaagcggaagatcgaacgggctgatgatgatgtttggggcgtc
ttagaagacgtcatcaaagaacatcccgtgttattaaaccgggcccctacgcttcaccgt
ttagggattcaagcttttgaacccgttttggttagtggtaaagcgatgcggttacatcca
ttggcttgtgaagcttacaatgccgatttcgatggggaccaaatggccattcatttgcct
ttgtcagatgaagcccaagctgaagcccgtttgttaatgttagcagcccatcatatctta
gcgcctaaggacgggaagcccgttgtaacgccttctcaagatatggttatcggtaactac
tacttgacgactgaagaagttggtcgtgaaggcgaaggcatgatcttcaaagacttgaat
gaagcacaaaaagcttatcaagctggttatgtgcacatgcatagccgggttggggttcaa
gcctcatcaatgcctgacaagccatttacggacgaagaaaagcaagaagtcttggttacg
acggttggtaaagcaatcttcaacaatatcttacctggtaagttcccatatttgaacgaa
ccaacgaatgataacttgattgatggtacgccggacaagtatttcttgaagccaggtgaa
aacattcatgacttcttagatggtcaagaattgattatgccattcaagaaaggcttctta
gcggatattatcgccgaagtttacaagcaatatcatgtgacggcaacgtcactcttgctt
gaccggatgaaagacttaggttacaacatttcaactaagtctggtttgacggtcggggtt
gccgatattactgacttgaaggaaaagccagcgattattgacgaagcccataagcaagtt
aatacgatttcaaaacagttccgtcgtgggttaattaccgacgatgaacgttatgaacgg
gtcattggtgtttggaacgacgccaaggatcaaattcaacaaaaactgattgaaagcttc
agtccagataacccaatttacatgatgagtgattctggtgctcgtggtaacatttctaac
tttacgcagttagctgggatgcgtggtttgatggccgctcctaatgggaagatcatggaa
ttgccgatcctttctaacttccgtgaaggactctcagtcttggaaatgtttatttcaacc
catggggctcgtaaagggatgaccgatacggccttgaagactgccaactcaggttacttg
acacgtcgacttgtcgatgttgcgcaagatgtcattgtgcgtgaaaaggattgtgggacc
gaccgtgggttacggatcagtgccatcatggaaggtaacgaagtcatcgaaccattgtac
gaccggattcttggtcgttacacgatgaagacgatctttgatcctgaaacacatgaagaa
atcattggtaacaacgttatgatcgatgaagacttggctcaaaagattgttgacgctggg
gttaccgaagtaacgattcgttcagcattcacttgcaacactaaacatggggtttgtgaa
cactgttatggtcgtaacatggctaccggtgacgaagttgaagtcggtgaagcggttggg
accgttgcggctcaatcaatcggtgaaccagggacgcagttaactatgcggactttccat
actggtggggttgccggagacgatattacccaagggttacctcgggttcaagaaatcgtt
gaatcacggaatcctaaaggtcgtgcggaaattaccgaagttactgggacggttgaatcg
atcgaagaaaacccagctgaacggacaaaggaagttacggttaagggcgaaactgatacc
cggacttatactttaccgctgacagcgcggatggcggttagtgaaggcgactttattcac
cgtggtgcagcgttgaacgttgggtcaattgatcctaaacaattaatccaagtgcgtgat
gttttatcaactgaaaactacttgctccgtgaagtccaacgggtttatcggatgcaaggg
gttgaaattggtgataagcacgttgaaatcatgattcgtcagatgcttcgtaaggtccgg
atcatggatccaggtgacactgatgtcttacctgggactttgatggatattgctgacttc
aaggatgaaaactacaagacattgattgctggtgggattccagcaacgtcacgtccagtt
attcttgggattacgaaagctgccttggaaactaatagtttcttatcagcggcttcattc
caggaaacaacacgggtcttaactgatgcggctattcgtggtaagaacgatccattgatc
ggtctgaaagaaaatgtcatcattggtaagattattcctgccgggactggtatgccgatc
tatcgtcatatcaagcctaaggaagttggtaacgtggctgatggggtttactcgatcagt
gatcttgaaaaacaaatgcaagaacaagacgctagcaagtaa

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