Lactiplantibacillus brownii: MH1LPH_15070
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Entry
MH1LPH_15070 CDS
T10750
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lbs Lactiplantibacillus brownii
Brite
KEGG Orthology (KO) [BR:
lbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbs03016
]
MH1LPH_15070 (truB)
Enzymes [BR:
lbs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MH1LPH_15070 (truB)
Transfer RNA biogenesis [BR:
lbs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MH1LPH_15070 (truB)
Prokaryotic type
MH1LPH_15070 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
OTCace
TerL_nuclease
Motif
Other DBs
NCBI-ProteinID:
BDZ31041
LinkDB
All DBs
Position
complement(1646889..1647812)
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AA seq
307 aa
AA seq
DB search
MPNGILPLYKPRGLTSFDCVAKIRRLYHTRKVGHSGTLDPSVDGVLPICIGNATKVVQFL
VASGKQYQGSMTLGFATTTEDLDGDEIERMAIAKPFTTAEIDAALATMTGEITQIPPMFS
AVKVNGRRLYDYARHGETVARPERHITIGRFVQRQAATYDAETQTQTIYFTVDCSKGTYV
RTLAVDVGKQLGVPAVMSDLTRLKSGGFNLAETITFDQIEAAVAAGTEADLLAPIEKALT
QYPQVALTAAQWARVKNGAWLLADEGQQANPDADTILALTYQDRIKCLYSYRTEEQRYKP
FKMFSVE
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgccaaacggaattttaccattatataaaccacgtggcttgacgagttttgactgcgtg
gctaaaattagaagactctatcatacccgcaaagtagggcattcagggactctagatcct
agtgtcgacggggtattacccatttgtattggcaacgctaccaaagtcgtgcagtttttg
gtggcttctggcaaacagtaccagggcagtatgacgttggggtttgcgacgaccacggaa
gatttagacggcgatgaaatcgagcgaatggccattgctaagccattcacgaccgctgaa
attgatgcggccttagccacgatgacgggcgagatcacgcagattccaccgatgttttcc
gccgttaaagtgaatggtcgtcggctatatgattatgctcgtcatggtgagaccgtggcc
cgacctgaacgtcacattacgattggtcgttttgtccaacgccaagctgcgacttatgat
gctgaaacgcaaacgcagaccatttattttacggtcgattgtagcaaagggacttatgtc
cgcaccttagcagtggatgtgggcaaacaacttggcgttccagcggtcatgagtgatttg
actcgtttgaagagtggcggctttaacttagctgagacgatcacgtttgaccagattgaa
gcagctgtggcggccgggacggaagctgacttgttggcaccaattgagaaagctttaacg
caatatccgcaggtcgcactaacggcagcgcaatgggcgcgggttaaaaatggtgcctgg
ttgttggcggatgaaggacagcaagccaatccggatgcggacacgattcttgcattgacc
taccaagaccgcataaaatgtttgtatagttatcggactgaagaacaacggtacaagccg
ttcaaaatgttctcagttgaataa
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