Lactiplantibacillus brownii: MH1LPH_16030
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Entry
MH1LPH_16030 CDS
T10750
Symbol
recD
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lbs Lactiplantibacillus brownii
Pathway
lbs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MH1LPH_16030 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbs03400
]
MH1LPH_16030 (recD)
Enzymes [BR:
lbs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MH1LPH_16030 (recD)
DNA repair and recombination proteins [BR:
lbs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MH1LPH_16030 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
AAA_22
Mg_chelatase
nSTAND3
AAA
NPHP3_N
AAA_28
TsaE
AAA_16
AAA_29
T2SSE
RsgA_GTPase
AAA_5
AAA_18
HTH_IclR
AAA_23
Motif
Other DBs
NCBI-ProteinID:
BDZ31137
LinkDB
All DBs
Position
complement(1748964..1751489)
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AA seq
841 aa
AA seq
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MPATDPSLFPDDQGGQTITRYIVGKVAAVFFSSSDSFYKVLLVKVTEQNIDWSEDEIVVT
GSFADIQEEATYKFTGKTVRHPKYGTQFQADNYQNETPTSRSGLIAYLAGSDFPGLGRRT
AERIVDTLGEDAIDKILADPKVLQPIGLRASVQQTLLDTLRVNNGLEQTIIGLNAYGFGS
RLAAAIYAKYQGDTLQVIQNDPYRLVEDIKGVGFKKADQIATQLKVDPQADSRLRAALLT
QINENCAQNGDTYTTAKPLITATLQLLENSRNVAIDPQKLADQLVGLAKDNKIVGEENRI
YLRNLYEAEWGIAEHLKRLHDADNDGNLTDKVVDRAIAHVAKASNLTYDESQTQALKSAV
TSHLFLLTGGPGTGKTTIIRGLVALFAELHDVSLDLNEYKEKSFPILLAAPTGRAAKRMA
ETTGLPAGTIHRLLGLTGRDDDPEMPTKDLEGGILIIDEMSMVDTTLFRLLLQAVPSHMQ
VILVGDKDQLPSVGAGQVFHDLLQSPELPQIELKTIYRQDDDSSIIPLAHAIKSGRLPDD
FRVNQPDRSFISCNAFQVNHIIEQVVSKAKAKGFTADEVQILAPMYRGAAGIDQLNTTVQ
NIFNPLKSKQQKRIRYNDQEFRVGDKVLQLVNAPEDNVFNGDIGKIVGIDLAKDPHNKSK
KDQLIIAFEQNEVTYQKSDWNRLTLAYSMSIHKSQGSQFKMVVLPLVPQFSRMLQRNLLY
TAVTRAEQILILLGDIQSFERSVTNESVNRLTTLTKRLQQVFTGEAVPDSPAPSSAETEA
TVDTPASVAPAATVAASTTDPETVTGPQRLTPALVQNGQIDPMIGMTGVTPEDFMPQSSV
S
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
gtgccggcaacagatcctagtttatttccggatgatcaaggtggtcagaccattacacgc
tatattgtgggtaaggttgcggccgtttttttcagtagttcggatagtttttataaagtt
ttacttgttaaagtgacagaacaaaatattgattggtccgaggatgaaattgttgtgacc
gggagctttgctgacattcaagaagaagccacctataagtttacgggtaaaaccgtgcgt
catcccaaatatggcacccaatttcaagctgacaactatcaaaatgaaaccccaacgtcg
cgaagtggtttgattgcttatttagctggcagtgattttcctggtttaggtcgacgaacg
gcagaacggattgtcgatacgctaggagaagatgccattgataagattctagcagaccct
aaagttttgcaaccgattggcttacgggcatcggtacagcaaacattattagatacttta
cgtgtcaataatggattagaacaaacgattattgggctgaatgcctatggttttgggagc
cgtttagcggccgcaatctatgcgaagtaccagggagatacgttgcaagtgattcaaaac
gatccttatcgtctagtggaagatatcaaaggagtcggtttcaagaaggcagatcaaatt
gccacacaacttaaagttgatccgcaggccgatagtcggttgcgggcggcattattgacc
cagatcaatgagaattgtgcacaaaatggcgatacttatacgaccgctaagcccttgatt
accgcaacgctgcaactacttgaaaactcacggaatgttgcgattgatccgcaaaagttg
gcggatcaattggtaggattggctaaggataataaaatcgttggcgaagaaaatcgcatt
tatcttcgcaacttatatgaagcagaatggggcattgctgagcaccttaaacggttacac
gatgccgacaatgatggcaacttgactgacaaagtcgtcgatcgggcgattgcccatgtg
gccaaagcgagcaacttaacttatgatgagtcgcaaactcaggctttaaaatcagcggtc
acgtcacacctgttccttttaaccgggggtcccgggaccggtaaaacgacgattattcgg
ggtttggtcgccttgtttgccgagttacatgacgtatcgttagatttgaatgagtacaaa
gaaaaaagtttcccaattttgttagctgcaccaactggtcgtgccgctaaacggatggcc
gagacgactggattaccagccggcacgattcaccgattactaggactgactggccgagat
gacgatcccgaaatgcctacgaaggatcttgaaggtggtattttaattattgatgaaatg
tcgatggttgatacgacgttatttcgactattgttacaagctgtgccaagtcatatgcaa
gtgattttagtgggtgataaggatcagttgccatcggtgggggctggccaagtctttcat
gacctgttacaaagtccagaactaccacaaattgaattaaagaccatttatcggcaagat
gatgattcaagtattattccactggcgcatgcgattaagtcaggccgtttgccggatgat
tttcgcgtcaatcagcccgatcgatctttcatttcctgcaatgcctttcaggtcaaccat
atcattgaacaggtggtgtctaaggcgaaggcgaaaggcttcaccgcggatgaggtgcaa
attcttgcgccgatgtatcggggtgccgctgggattgatcagttgaatacgacggtgcaa
aatatttttaatcccttgaaatccaaacaacagaagcgaatcagatataatgatcaggaa
tttcgggttggcgacaaagtattacagttggtcaatgcgccagaagataatgtttttaat
ggcgatatcggtaaaattgttgggatcgatttagcgaaagatccacacaataagtcgaaa
aaagaccaattgattatcgcttttgagcaaaatgaagtgacttaccaaaagtcggattgg
aatcgactgacattagcttatagtatgtcgattcataagtcgcaagggagtcaattcaaa
atggtcgtgttgccattagtgccacagttttcaagaatgttgcaacgtaatttactttat
acggcagtgacacgtgccgaacaaattttgattttattaggcgatattcaatctttcgaa
cgtagtgtgactaatgaatcggtcaaccgattgacgactttgaccaaacgattgcaacaa
gtcttcacgggtgaagcagttccggattcgccagcgccaagcagtgccgagactgaagcc
actgtcgacacacctgcctcagtggcaccagctgcaacggttgcggcgtcaacgactgac
cccgagactgtgaccggaccacaacggctaacgccggcattggtacagaatggtcaaatt
gatcccatgattgggatgactggcgtgacgcctgaagatttcatgccacaatcatcagta
tcttaa
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