Lactiplantibacillus brownii: MH1LPH_27230
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Entry
MH1LPH_27230 CDS
T10750
Symbol
sbcC
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lbs Lactiplantibacillus brownii
Brite
KEGG Orthology (KO) [BR:
lbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbs03400
]
MH1LPH_27230 (sbcC)
DNA repair and recombination proteins [BR:
lbs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MH1LPH_27230 (sbcC)
Archaeal homologous recombinant proteins
MH1LPH_27230 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
IFT57
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BDZ32257
LinkDB
All DBs
Position
complement(2918811..2921945)
Genome browser
AA seq
1044 aa
AA seq
DB search
MRPLTLQLAFFGPFRQQKIDFTKFTDFPVFLISGKTGAGKTTIFDAMCFALFGGTSGGDR
QVKQMRSDFATFDDETSVTFNFEHQGRTYQVVRLPEQEVAKKRGDGTHVQPAAVTLTVFD
EAGQEVDELTKVNQVQAYIRDLLQLTREQFSQIVLLPQGQFRQFLMANSDDKEKVLRDIF
GTSLYRDWADQLRRQLKQQQQVSAQATQTLQTYQQQLTWTDLATAEAAKLAPQAAVDRQL
TAQAAQTTQRAELKTTFDAAKKALEKAQQAEQTGQTLQKNHDQLAKLLTIQARLTEQRPI
IEAQRTQVKTLEWGQGLANAAQQRTLAQKQVQTESAEQQQLTTRQAELTTAQAAASATVK
RLADQQTVAKQRQADITTLTGKRRVYEQVDQTKQALKQAKQAESKQQNVQATTTATLSEL
TSEQTTLTPIGAQLPEFMTQAAGLTTRQRDLADWHQQLSAVKRQQQVIEKAQQTVTQQQK
LVTKQQAQVSEKEQRYLQLDSDWASAQIAILSQRLLPNQPCPVCGSTEHPQPAPVETITV
TEAAVKKAQTASVEANKKLASGQSQLASQQQAVTTAQAQLTSLMTTLKTAIGDLADEAAT
LATIETKLQTAEQALALKQRANADQIKRAQQAQQRLTALKTQLAEVTAQQQQQAQVVTAA
TNQVLQLQTQLTDRQKQLSPDYPTLTALETYLKQLKADQAKYEATVKQADQALAQLNDQL
SAVKAQLSTTQKHLNTAQATVASQTADLTAAMTATWGTADFERLQQLLSQLPTLPELRQT
ISDYDQQRSGLQGQLTTVKQAIAERPAPDLAALSEQVRTAQTVEQQVEQQYYDLDRQLRA
NQALVKKMQTTLAAVHEQQAQLAELSQLSQVANGNGAQKLSLERFVLQTYLQKVLHKGNQ
RLQQLTRGRYQFQLETSYGTYRNGTGLEINIYDDNAGKVRSVHTLSGGESFVAALSLALA
LAEVIQEQAGGIKIDALFIDEGFGSLDEEALEMAMETLQQVEGQSRMIGIISHVTELESQ
LPAQLQVIPEGNGESRVNYQLAFD
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgcgacctttaacgttacaattggccttttttggcccctttcgtcaacaaaaaatagac
tttactaaatttactgattttccagtttttttgattagcgggaagacaggtgcaggtaaa
acgacgatttttgatgcgatgtgctttgccttgtttggcggcacgtctggtggcgatcgc
caagtgaagcaaatgcgttcagactttgcgacctttgatgatgagactagtgtcaccttt
aactttgaacatcaggggcggacgtatcaggtcgtccgtttaccagaacaagaagtcgca
aaaaagcgtggtgacggtacccatgtacagcccgcagcagtgactttgacggtttttgac
gaggctggacaggaagttgatgagttaactaaagttaaccaagttcaagcttatattcgt
gacttattacaactgactcgtgaacaattttcacaaatcgtgttattgccacaaggtcaa
tttcgccaatttttgatggctaacagtgatgataaagaaaaagtattgcgtgatattttt
gggacgtcgttgtatcgcgattgggcggatcaactgcggcggcaattgaagcagcagcaa
caagtgagcgcccaagccacgcagacactacaaacctatcagcagcagttaacttggaca
gatttagcaacggctgaagcggccaagttagcgccacaagcggcagttgaccgccaatta
acggcacaggcggctcaaacgacacaacgtgctgaactgaaaacaacatttgatgcggct
aaaaaagcgctagaaaaagcccaacaagctgagcaaacgggtcaaactttacaaaaaaat
catgatcagttagcgaaattactgactatacaagcacgattgactgagcagcgaccaatc
attgaggcacagcggacacaggtcaaaacgttggaatggggtcaaggcttagcaaatgct
gcacaacaacgtaccttggcacaaaaacaggtgcaaactgaatccgctgaacaacaacag
ttgacgacacgacaagctgaattgacaacggcacaagccgcagcgagcgctactgttaaa
cggttggccgatcaacaaacggttgctaagcaacgacaagccgacattaccactttgacg
ggaaaacgccgcgtttatgaacaagtggatcaaacaaagcaagccttaaagcaggccaaa
caagcagaaagcaagcaacagaacgttcaagcaacgacgacagccaccttgtctgaattg
acatcagagcaaacgacacttacgccaattggcgcccaattgccagagttcatgacgcaa
gcggcaggtttaaccacccggcaacgtgatttggctgattggcatcaacagctaagcgct
gtgaaacggcaacaacaagtgattgaaaaagcccaacagacggttactcagcaacaaaaa
ttagtgacaaaacagcaggctcaggtgagcgaaaaggaacagcgttatctacaattagat
agcgattgggccagtgcacagattgcgatattgagtcagcgactcttgccgaatcagcct
tgcccggtctgcggctcaaccgaacatccacaaccggcccctgttgaaacgattacggta
accgaagccgccgttaaaaaagcgcaaaccgcgagtgttgaggcaaacaagaagttggct
tcagggcaaagtcagttagccagtcagcaacaagccgtcacgacggcacaagcccaatta
acgagtttgatgactacgcttaaaaccgcaatcggtgatcttgccgatgaagccgcgaca
ttagcgacgatcgaaactaagctgcagaccgcagaacaagcattggctttaaagcaacga
gccaatgccgaccagatcaaacgcgctcagcaagcgcaacaacgtttaacagcgttaaaa
acgcaacttgctgaagtgaccgcccaacaacagcaacaagcccaagttgtcacggccgcc
acgaaccaagtgctgcaattacaaacgcaattaactgatcggcaaaaacaattatcgccg
gattatccaactttgacggcccttgaaacttatctgaaacaactcaaggctgaccaggcc
aaatatgaagcaaccgtaaaacaggctgaccaagcattggctcagttaaatgatcagttg
tcggccgttaaggctcaattgagtaccacccaaaagcatttgaatacggcccaggcgacg
gtggctagtcaaacagcggacttaacggccgcgatgactgcgacatggggaacagccgac
tttgaacgattgcaacaacttcttagtcagttgccaacgttacctgagttgcgacaaacg
attagcgattatgatcagcaacgttcggggttacaaggccaactgacaacggtgaagcag
gcgattgccgagcgccccgcgcctgatctagcggcgctatctgaacaagttcgaacggcg
caaacggtggagcaacaagtggaacaacagtattatgacttagatcgtcaactacgagct
aatcaagctttggtcaaaaaaatgcagacgaccttggctgcggtgcatgagcaacaggca
cagttagcggagctctcacaattgtcacaagtggccaatggtaatggcgcgcaaaaactc
agcttagaacgttttgtgctacagacctatttgcaaaaggtgctgcacaaaggaaatcaa
cggctgcagcagttgacacgtgggcgttatcaattccaattggaaacgtcttatggcact
tatcgtaacgggactggcttggaaatcaatatctatgatgataatgccgggaaagttcgt
agcgtgcatacgttatctggtggtgagagctttgttgctgcactatctttggcgttagcg
ttagccgaagtgattcaagagcaagccggtggcatcaaaattgatgccttgttcattgat
gaaggctttgggtcattagatgaagaagccttagaaatggccatggaaactttacaacaa
gttgaagggcaatcacggatgatcgggattatcagtcatgtgacagagctagaaagtcag
ttaccagcacaattacaagtgattccagaaggtaacggcgaaagtcgggtaaactatcag
ttagcatttgactag
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