Loigolactobacillus backii: AYR52_02280
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Entry
AYR52_02280 CDS
T04754
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lbt
Loigolactobacillus backii
Brite
KEGG Orthology (KO) [BR:
lbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbt03019
]
AYR52_02280
03009 Ribosome biogenesis [BR:
lbt03009
]
AYR52_02280
Enzymes [BR:
lbt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AYR52_02280
Messenger RNA biogenesis [BR:
lbt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AYR52_02280
Ribosome biogenesis [BR:
lbt03009
]
Prokaryotic type
rRNA helicases
AYR52_02280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF2608
Helicase_RecD
CMS1
Wzy_C_2
Motif
Other DBs
NCBI-ProteinID:
ANK59200
UniProt:
A0A192H309
LinkDB
All DBs
Position
545838..547202
Genome browser
AA seq
454 aa
AA seq
DB search
MKEVFMSKQFTDFKLQPYIIAALQAIHFKEATPIQERLIPVIASGKSVVGQSQTGSGKTH
AFLVPIFNVLDPTNQDVQVVITTPSRELAEQIFQAAEQIAKFSPRPIRIHNYVGGTDKKR
QIEKLHHQQPQIVIGTPGRIRDLIDNEALKSYTATTFVVDEADMTLDMGFLNDVDKIAAT
FPDNLQMLVFSATIPQKLQPFLKKYLNAPVIEEIPATTVISPTIDNWLVSTQGKSKNELI
YHLLTAINPYLALVFANTKRNVDDIAAYLTKRGLKVAKISGDLSPRDRKKTMRQIQNLDF
QYVVATDLASRGIDIPGISHVINAEIPDDLDFFIHRVGRTGRNGLSGIAMTLYEPGQENL
VTEIEKLGIEFEPKQVKNGEIVDTYDRNRRAKREKTKPALDTRLVGLAKKEKKKHKPGYK
KRIRKAIQKDEWFKRRVRHQKEARDERTKRRNEH
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaggtttttatgagtaaacaatttacagattttaaattgcagccctatattata
gcggcactacaagcaattcattttaaagaagcaacaccaattcaagagcgtttaattcca
gtgattgcgtctggcaagagtgttgttggccaatcacaaaccgggagcggtaaaacgcac
gcctttttggtaccaatttttaatgtactagatccaactaatcaagatgttcaagtagtt
attacgacacctagtcgagaactggctgagcaaatttttcaggccgctgagcagattgca
aaatttagtccccggccaattcgaattcataactacgttggtggaaccgataagaagcgc
caaattgagaaattacaccaccagcaaccgcaaattgtgattggtacccctggacgaatt
cgcgatttaattgataatgaagctttgaagagttacactgcaacaacttttgtcgtcgat
gaagcagatatgacgttagatatgggctttttaaatgatgttgataaaattgcggcaaca
ttcccggataacttgcaaatgctagttttctcggcaactattcctcaaaaattgcaacca
tttttgaagaaatatttgaacgcaccagttattgaagaaattccagcgacgactgtgatt
agtccaaccatcgataactggcttgtgtccacgcaaggtaagagtaaaaacgagctaatt
tatcatttattaacggcaatcaacccttacctggccttagtttttgctaacactaagcgc
aatgttgatgatattgcagcctatttaaccaaacgtggtttaaaagttgctaaaatttct
ggtgatctaagtccccgtgatcgtaaaaaaaccatgcggcaaatccaaaaccttgatttt
caatacgttgtggcaactgatttggcctcacggggaattgatattcctggtatttctcac
gttattaatgctgaaattccggatgatttggatttctttattcaccgtgttggaagaact
ggccgaaacgggttatcaggaattgcaatgaccttgtatgagccaggacaagaaaatttg
gtaaccgaaattgaaaaattgggaattgagtttgaacctaaacaggttaaaaatggcgaa
attgttgatacctatgaccgaaatcggcgggcaaaacgtgaaaaaactaagccggcatta
gatacacgcctcgttggtttagcaaagaaagaaaagaaaaagcataagccaggttacaag
aaacgaattcgtaaggccattcaaaaggatgaatggtttaagcgccgggtacggcatcaa
aaagaggcacgggatgaacgcactaagcgccgaaatgaacattag
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