Loigolactobacillus backii: AYR52_04005
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Entry
AYR52_04005 CDS
T04754
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lbt
Loigolactobacillus backii
Brite
KEGG Orthology (KO) [BR:
lbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbt03032
]
AYR52_04005
03400 DNA repair and recombination proteins [BR:
lbt03400
]
AYR52_04005
Enzymes [BR:
lbt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AYR52_04005
DNA replication proteins [BR:
lbt03032
]
Prokaryotic type
DNA Topoisomerases
AYR52_04005
DNA repair and recombination proteins [BR:
lbt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AYR52_04005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ANK59481
UniProt:
A0A192H412
LinkDB
All DBs
Position
885957..888035
Genome browser
AA seq
692 aa
AA seq
DB search
MAYKNLVIVESPSKAKTIEKYLGRNYKVVASLGHIRDLPKSKMGVDVENDYEPHYISIRG
KGDTIKNLKKYAKKAERVYLASDPDREGEAIAWHVSHILGLDPKDKNRVTFNEITKDTVK
NAFKEPRSIDMDLVDAQQARRIMDRLVGYSISPLLWKKVKKGLSAGRVQSIALKIIIDRE
NEIKAFKPEEYWTIDSQFKKGTYKFDASFYGLNGKKLALSNEDAAKDILQRIKPRANFDI
TKVTKRERKRFPQAPFTTSSLQQEAVRRLNFRTRKTMMVAQQLYEGINLGGRQGSVGLIT
YMRTDSTRVSHIARHEASEFLHANYGEEYAALKIRKTKNPEGAQDAHEAIRPSSVKRTPK
SLEGVLNKDQMKLYKLVWSRFLASQMTPAILDTMAVTIEQNGVTYRANGSKMKFAGFTKV
YDAPGNQDKKDNMLPDLVEGDHVKLVKNDPNQHFTQPPARYSEATLIKTLEENGVGRPST
YAPTIETIQRRYYVRLITKRFEPTELGEIVNKIIVEFFPDIVNIDFTAGLENDLDSIEEG
KTKWIKVVDEFYQPFEKEVTSAESKIEKVQIKDELAGFNCDICGAPMVIKLGRYGKFYAC
SRFPDCRNTKAIVKEIGVVCPTCHKGQVVERKSKKNRIFYGCSRYPECDFVTWDKPVGRD
CPKDGHYLVEKKIKGGKQVICPNGDYEEAVQK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcctataaaaacctcgtgatcgtggaatcaccgtctaaagccaagacgattgaaaag
tatttaggccgtaactataaagtagttgccagcctcggccatattcgtgatttaccaaaa
agtaaaatgggtgtggacgttgaaaatgattacgaaccacactacatctctattcgcggt
aaaggcgataccattaaaaatttaaaaaaatacgctaaaaaagcggagcgcgtctaccta
gcatctgatcctgatcgtgaaggtgaggccattgcctggcacgtttcccatattttaggt
ttagacccaaaggataaaaatcgggtaacttttaacgagattactaaagacaccgtcaaa
aatgcctttaaggaaccccgtagcattgatatggacctagttgacgcccagcaggcacgg
cgaattatggatcgcctagttggctattcaatttcaccgctattgtggaaaaaggttaaa
aaaggcctaagtgccggccgcgtccaatcaattgcactgaaaataattattgatcgagaa
aacgaaattaaggcgtttaagcccgaagaatactggacgattgattcacagttcaaaaaa
ggcacgtataaatttgacgccagtttctacggtttaaacggtaaaaagttagctttaagt
aatgaggatgctgccaaggatatcttacagcggattaaaccgagagctaattttgacatt
accaaagtaactaagcgggagcgcaaacgttttccccaagcaccatttacaaccagttca
ctgcaacaagaagcagttcggcgtttgaatttccggacccggaaaacgatgatggtggct
cagcagctgtatgaaggcattaatttgggtggtcgtcaaggcagtgttggtttaattacc
tatatgcgaactgattccactcgagtttcgcatattgcccgccatgaggccagtgagttt
ttacacgctaactatggtgaagaatacgcggccctgaagattcgtaaaaccaagaatcca
gagggcgcccaagatgcccatgaagcgattcggccttcgtcagttaagcggacaccaaag
agcttagagggcgttttgaataaagatcagatgaagctgtataagttagtctggtcacgt
tttttggccagtcaaatgacaccggctattttagatacgatggccgttaccatcgagcaa
aatggtgtcacctaccgggcaaatggctctaagatgaagtttgctggtttcactaaggtt
tatgatgcacctggtaatcaggataaaaaagataatatgctgcctgatttagttgaaggc
gaccacgttaaattagttaaaaatgatcccaatcagcattttacccagccaccggcacgt
tattctgaagcaaccttgattaaaactttggaagaaaacggtgttggccgaccatcaacc
tacgcaccaacaattgaaacgattcaacggcgttattacgtcaggttgatcaccaaacgt
tttgaaccaactgaattaggtgaaattgttaataagattattgtcgaattcttccccgat
attgttaacattgattttactgctggtttagaaaatgatttggatagcattgaagaaggc
aagacgaagtggattaaggtggtggatgaattttaccaaccatttgaaaaagaggtcact
tccgccgaatctaagattgaaaaagttcaaatcaaggacgaattagcgggctttaactgt
gatatttgtggcgcaccaatggtcatcaaattaggccgttacggtaagttctacgcctgc
agtcgtttccctgattgccgtaataccaaggccatcgtcaaagaaatcggcgttgtttgt
ccgacctgccataagggtcaagttgtcgaacgtaaatcaaagaaaaaccgaattttctat
ggttgcagtcgttatcctgagtgcgattttgtgacttgggataagccagttgggcgtgat
tgtccgaaagacggtcattacttagttgaaaagaaaattaaaggcggcaaacaagttatt
tgtccaaacggtgattatgaagaagccgttcaaaaatag
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