Loigolactobacillus backii: AYR52_04615
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Entry
AYR52_04615 CDS
T04754
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
lbt
Loigolactobacillus backii
Pathway
lbt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AYR52_04615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbt03400
]
AYR52_04615
DNA repair and recombination proteins [BR:
lbt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AYR52_04615
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AYR52_04615
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
ANK59594
UniProt:
A0A192H205
LinkDB
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Position
complement(1029721..1030494)
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AA seq
257 aa
AA seq
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MAQRQITDFNGLVMFRRDYRERDMLVKFFTDQFGKKMFFIRGARKRGFKLAAALLPFTQG
TYVGNIHEEGLSFINAAKEYHQFQSISTDIGLNAYATYILNLIDVAFTDNQPLPRWYQQA
VLSVQLIDDGFDPEIITNINEIQLLAAFGVAPYLESCVICHRSDLPLDYSESYGGLLCQK
HFHLDPYRFHASARAIYLLRQFSVLNLSKLTSISVKQATKDELRRIIDRIYSDTVGLSLK
SKHFIDDMKNWDHLLKP
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
gtggcacagcgacaaataactgactttaatggtttagtgatgtttcgccgggattaccgg
gaacgtgatatgttggttaagttttttactgatcaatttggtaaaaaaatgttttttatt
cgtggcgcacgcaaacgcggttttaaattggcggctgcattactaccctttacgcaagga
acttacgttggaaatattcacgaagaagggttgtcatttattaacgcggctaaagagtac
catcaatttcaaagcatctcgactgatattggtttaaatgcgtacgcaacctacatctta
aatttgattgatgttgcttttacggataaccaaccgttaccgcgctggtaccaacaggcc
gttttatcggtgcaactgatcgacgatggatttgatccagagattatcacgaacattaat
gaaattcagttgttggcggcgtttggagtggcaccttacttagaaagctgtgtcatttgt
caccgaagtgatcttcccttagactattctgaaagttatggcggcctgttgtgtcagaag
cacttccatttggatccttatcgctttcatgcaagtgcgcgggcaatttatttgctgcgc
cagttttcggtgcttaatttaagtaagttgacgtcaatttcggtgaagcaagctactaag
gatgaattgcggcgaataattgaccgcatttatagtgatacagtaggtctatcattaaaa
agtaaacattttattgatgatatgaaaaattgggatcacctgttgaaaccataa
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