Loigolactobacillus backii: AYR52_06535
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Entry
AYR52_06535 CDS
T04754
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lbt
Loigolactobacillus backii
Pathway
lbt03030
DNA replication
lbt03430
Mismatch repair
lbt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AYR52_06535
03430 Mismatch repair
AYR52_06535
03440 Homologous recombination
AYR52_06535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbt03032
]
AYR52_06535
03400 DNA repair and recombination proteins [BR:
lbt03400
]
AYR52_06535
Enzymes [BR:
lbt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AYR52_06535
DNA replication proteins [BR:
lbt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AYR52_06535
DNA repair and recombination proteins [BR:
lbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AYR52_06535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ANK60939
UniProt:
A0A192H4W2
LinkDB
All DBs
Position
1417641..1418177
Genome browser
AA seq
178 aa
AA seq
DB search
MNFVAMDFETANSKRYSACSIALTIVRDSQVVDEFYSLIKPDTPFSWRNEKIHGIHTADV
STAPDFPAVWPHMAPFFQRNRLVVAHNANFDIGVLRSCLEHYQLQQPEYLALDTVKTSRQ
FFPEFPNHKLDTVCRELEIDLYHHHNALDDSLACANILLCEANQFGTAPLQKLVKVIA
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgttgcaatggattttgaaactgcgaacagcaaacgctatagtgcctgttca
atcgcgcttacaattgttcgtgatagtcaggtagttgatgaattttactcactaattaaa
cctgatacgccgtttagctggcgtaatgaaaaaattcacggcattcatacggctgacgtt
agtaccgcaccggattttccagctgtttggccgcatatggcaccttttttccagcgaaac
cgattagttgtcgcgcataacgctaattttgatattggggttctccgcagctgtctagag
cactaccaattacagcaacctgagtacttagcgctagatacggtaaaaacaagtcgccaa
ttcttccctgaatttcctaatcacaagctggataccgtttgccgtgagttagaaattgat
ttataccatcaccacaacgcattagatgacagcctagcttgtgctaatattttgctttgt
gaagccaatcaatttggtaccgccccattacaaaaattagttaaggtcatcgcttag
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