Loigolactobacillus backii: AYR52_07485
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Entry
AYR52_07485 CDS
T04754
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lbt
Loigolactobacillus backii
Brite
KEGG Orthology (KO) [BR:
lbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbt03009
]
AYR52_07485
Enzymes [BR:
lbt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
AYR52_07485
Ribosome biogenesis [BR:
lbt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AYR52_07485
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_15
PrmA
TRM5-TYW2_MTfase
Methyltransf_25
MTS
Methyltransf_4
AsnC_trans_reg
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
ANK60111
UniProt:
A0A192H3R4
LinkDB
All DBs
Position
complement(1602391..1603755)
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AA seq
454 aa
AA seq
DB search
MKTTAPVEKNQELTVDIEDLTYEGMGVAKVDGYPLFVADTLPGEKVKLVVTKTGKNFGFA
RALELLTTSPDRVDLKDKTYMQTGIAPLGHLSYEGQLKFKQHQIAEVFQKSHLDIPVLPT
IGMEKPYAYRNKAQVPVRMLYGEIQTGFYRKGSHNLVPMEDYYIQDPAIDKAIVIIRDLL
RQYNVAPYNESQQKGVMRNIMIRRGHFSHEMMVILITRTRDVPHLNELIAGILNKIPEVV
SIMQSVNPKNTNVVLGRTVKKLYGKSFIRDQILGLNFDISALSFYQVNPVQTERLYTRAI
EQAGLTGKEVVIDAYSGIGTMSLAMAQHAKYVYGVEVVVPAVADAKRNAKLNGIHNVKFE
AGKAEEVMQQWKADGLEADVLMVDPPRKGLAKSFVDAVGQMKPKRVVYVSCNPATLARDL
SLLQEFGYHAKETQPVDMFPQTQHIESVTMLSLD
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaacggcaccagttgaaaaaaatcaagaactaacagttgatattgaagattta
acttatgaaggaatgggtgttgccaaggttgatggctaccccttgtttgttgcggatact
ttaccaggagaaaaggtcaagcttgttgtgactaaaacaggcaagaattttggctttgct
cgtgcattagagttgctcacaacaagtcctgatcgagttgacttgaaagataaaacgtac
atgcaaactgggattgcaccattaggccatttaagctatgaaggtcagttgaagttcaaa
caacaccaaattgctgaggtcttccaaaagagtcatttagatattccagtattaccaacg
attggtatggagaagccttacgcttaccggaataaggcgcaagtgccagtacggatgctt
tacggtgaaattcagactggcttttaccgcaaaggcagtcataatttagtgccaatggag
gactattatattcaggatccagccattgataaagctattgtgattattcgtgacttattg
cgccaatataacgttgcgccgtacaatgaatcccaacaaaaaggggttatgcgtaatatc
atgattcgccgtggtcattttagccacgaaatgatggttattttgatcacacgtacaaga
gatgttccgcatttgaacgaattaattgcgggtattttaaataaaatacctgaagttgtt
agtattatgcaaagtgttaatcctaagaatacgaacgttgtgcttggccggacggttaaa
aaattatacggcaagtctttcattcgcgatcaaattctcggcttaaacttcgatatttcg
gcattatcgttctaccaagttaacccagttcagactgaacgtttgtacacacgtgccatt
gagcaggcgggcttaaccggtaaggaagttgttatcgatgcatattcaggtatcggaacg
atgtcgcttgcaatggcgcaacacgcaaagtacgtttacggcgttgaagttgttgttcca
gcagtagccgatgcaaagcgaaacgctaaattaaatggtatccataacgtgaaatttgaa
gctggcaaggctgaagaagtgatgcaacagtggaaggctgacggattagaagctgacgtt
ttgatggttgatccaccacgcaaaggtttggccaaatcatttgtcgatgcagttggccaa
atgaagccaaaacgagtggtttacgttagctgtaacccagcaaccttggcccgagatttg
agcttgctgcaagaatttggttatcacgcaaaagaaacccaaccagtcgatatgttcccc
caaacgcaacacatcgagagtgtaacaatgttgagtttggattaa
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