Loigolactobacillus backii: AYR52_07765
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Entry
AYR52_07765 CDS
T04754
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lbt
Loigolactobacillus backii
Pathway
lbt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lbt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AYR52_07765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbt03021
]
AYR52_07765
03400 DNA repair and recombination proteins [BR:
lbt03400
]
AYR52_07765
Enzymes [BR:
lbt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AYR52_07765
Transcription machinery [BR:
lbt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AYR52_07765
DNA repair and recombination proteins [BR:
lbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AYR52_07765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
PRC_RimM
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ANK60162
LinkDB
All DBs
Position
complement(1648132..1651791)
Genome browser
AA seq
1219 aa
AA seq
DB search
MIDVNKFESMQIGLASPDKIRSWSYGEVKKPETINYRTLKPERDGLFDERIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEIIYFASYVVIESGNTALEKKQLLTESEYREKYEQYGHEFKAKMGAEAIKELLD
DVDLDKEVAGLKEDLKTAQGQKRTRAIRRLDILEAFRQSGNEPSWMVMDAIPVIPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPNIIVQNEKRILQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHLLKGKQGRFRQNLLGKRVDYSGRSVIDVGPTLKFYQCGLPRE
MALELFKPFVMHELVKRELASNIKNAKRKIDRRDEDIWDVLEDVIKEHPVLLNRAPTLHR
LGIQAFEPVLVDGKSIRLHPLACEAYNADFDGDQMAIHVPLSDEAQAEARMLMLAAHHIL
APRDGKPISTPSQDVVLGNYFLTTEEAGINGEGMIFKDPNEVVLAYQNGYVELHTRIGLA
TNSLLDKPFSDKQRNKIMITSVGKVAFNAILPKDFVYLNEPTNGNLMDGIDDKFFIEPGT
DIKAAIKDRDLNQPFKKSFLADIIAQVFKIYKVTETSELLDRMKTLGYTEATHSGITVGV
SDVNDLPEKPALVAEAHKQVALITKQFRRGLITDDERYQRVIGIWNSVKDQIQQRLMENM
PANNPIFMMSDSGARGNASNFTQLAGMRGLMAAPNGQIMELPVISNFREGLSVMEMFIST
HGARKGMTDTALKTANSGYLTRRLVDVAQDVIVREEDCGTDRGLEVSAIMEGNEVIEPLY
DRILGRYTMKSIYDPETGEEFAGKNVMIDETLAQKIINAGIKTVTIRSVFTCNTEHGVCR
YCFGRNLAIGETVEVGEAVGTVAAQSIGEPGTQLTMRTFHTGGVAGGDITQGLPRVQEIM
EARNPKGLATITEVTGEITAIDENPADHTKEITVQGETDTRTYSVPFTSRIRIKEGDLVN
RGDSLTGGSIDPKQLLQVSDTLTTEIYMLREIQKVYRMQGVEVSDKHMEVMVRQMMRKVR
VMDPGDTDILPGTLLDIADFKRANYKTLIAGGIPATARPVLLGITKAALETNSFLSAASF
QETTRVLTDAAIRGKNDPLLGLKENVIIGKIIPAGTGMAKYRHTEPKEVGVVSENVYSIS
DLEKQMNANNGEGQQPDNN
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
gtgatagatgttaataaatttgagagtatgcagattgggcttgcatctcccgataaaatc
cgcagttggtcttatggtgaagttaaaaagccagaaacaatcaactaccgaacactaaag
ccagaacgcgatggtctgtttgatgaacggatttttggcccgacgaaagactgggaatgt
gcttgtggtaaatacaaacgaattcgctataagggaatcgtttgtgatcgctgcggggtt
gaagttacgcgttctaaggttcgtcgtgaacgaatgggtcacattgaactagcagcgcca
gtttcacatatttggtacttcaaaggtattccaagccgaatgggtcttgttttagacatg
agcccccgcgctttggaagagatcatttacttcgcatcctacgttgtcattgaatccggc
aacactgccttagaaaagaaacaacttttaactgaaagtgaataccgtgaaaagtatgaa
cagtacggtcatgagtttaaagctaagatgggtgctgaagccatcaaagaattattagat
gacgttgacctagataaagaagttgctgggcttaaggaagatctaaagactgctcaaggc
caaaaacggactcgtgctattcgacgtttagatattcttgaagctttccgtcaatctggt
aacgaacctagttggatggttatggatgccattcctgttattccaccggatttacgacca
atggttcaattagaaggtggccgttttgccacttctgatttaaatgatttataccggcgg
gtgatcaaccggaataatcggttgaaacgactacttgatttaaatgcgcctaatatcatt
gttcaaaacgaaaaacggattctccaagaagccgtcgacgctttgatcgataatggccgt
cgtggccgtccagttactgggcctggtaatcgtccgttaaaatcactttcacatttattg
aaggggaaacaaggacgtttccgccagaacttgttaggtaagcgggttgattattcaggt
cgttcagttattgatgtcggcccaacgcttaaattctatcaatgtggtttaccacgtgaa
atggcacttgaattattcaaaccatttgtcatgcatgaattagttaaacgtgaattagcg
tcgaacattaagaatgctaagcgtaaaattgatcgtcgggatgaagatatttgggatgtc
ttggaagatgttattaaagaacacccagtactattaaaccgggcacctacattacatcgt
ttgggtattcaggcatttgaaccagttttagttgatggtaaatcaattcgtctgcaccca
cttgcttgtgaggcctacaacgccgattttgatggtgatcagatggcgattcacgtacca
ttatctgatgaagctcaggctgaagcacggatgttaatgttagctgctcaccatatcttg
gccccacgtgatggtaagccaatttcaacaccttcacaggacgttgtgcttggtaactac
ttcttaacaactgaagaagctggcattaacggtgaaggcatgatctttaaggatcctaat
gaagttgttttggcttatcaaaatggctacgttgaattgcatacgcgtattggtttagca
accaattcattactagacaagcctttctctgataaacaacggaataaaattatgattact
tcagttggtaaggtagcctttaacgcaattttgccaaaggactttgtttatttgaacgaa
ccaactaacggtaacttgatggatggaattgacgataagttctttattgaacctggtact
gatatcaaggctgccattaaagatcgtgatttgaaccagcccttcaagaagagcttcttg
gccgacatcattgcacaagtctttaagatctataaggtaaccgaaacatctgagttattg
gatcgaatgaagactttaggttatacggaagcgacgcattcagggattaccgttggggtt
tctgatgtcaatgacttgcctgaaaagcctgccttagttgcagaagcacataagcaagtt
gctttgattacgaaacagttccgtcgtggtttaattactgatgatgaacgttatcaacgt
gtcattggtatttggaacagcgttaaggatcaaatccaacaacggttaatggaaaatatg
cctgcaaacaatccaatctttatgatgagtgattctggtgcccgtggtaatgcatctaac
tttacacagttagctggtatgcgtggtttaatggctgctcctaatggacaaatcatggaa
ttaccagttatttcaaacttccgtgagggtctctccgttatggaaatgtttatttcaacc
catggtgctcgtaaagggatgaccgatacagcactgaagaccgctaactccggttactta
actcgtcgtttagtcgatgttgcccaggatgttatcgttcgtgaagaagattgtggaact
gatcgtggcttagaagtatctgccattatggaaggtaacgaagtcatcgaaccactttat
gatcgaattcttggtcgttacacgatgaaatcaatttatgaccctgaaaccggtgaagaa
tttgccggtaagaacgttatgattgatgaaacgttggcgcaaaagattattaatgccgga
attaagaccgtcacaattcgttccgtctttacttgtaacactgaacatggtgtttgccgt
tattgcttcggtcgtaacttggccattggtgaaaccgtcgaagttggtgaagccgttggg
acagttgctgcgcagtcaatcggtgaacctggtacacagttaacaatgcggactttccat
accggtggtgttgccggtggcgatattacgcaagggttgcctcgtgttcaggaaattatg
gaagcacgtaatcctaaaggccttgcaacgattactgaagttactggtgaaattacagcg
attgatgaaaatccagctgaccacactaaggaaattacggttcaaggcgaaactgataca
cgaacttatagtgtaccgtttacgtcacgaatccgaattaaggaaggcgaccttgttaat
cgtggtgattcactaactggtgggtcaattgatcctaaacaactattacaagtcagtgat
accttaacaactgaaatctatatgcttcgcgaaattcaaaaagtataccggatgcaaggt
gttgaagtttctgataagcatatggaagttatggttcggcaaatgatgcgcaaagttcgt
gttatggatcctggcgatacggatatcttgccaggaacattacttgatattgccgacttt
aagcgagcaaactataagaccttaattgctggcggtattccagcaacagcacgtcctgtc
ttacttgggattactaaggctgctctagaaactaatagtttcttatctgcagcttcattc
caagaaacaactcgtgtcttgactgacgccgcaattcggggcaagaatgatccattactt
ggtctaaaagaaaatgttattatcgggaagattattcctgctggtactggtatggctaag
tatcgtcatactgaaccaaaagaagttggtgttgtttccgagaacgtctattcaattagt
gatcttgaaaaacaaatgaacgccaataatggtgaaggtcaacaaccagataataattaa
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