Loigolactobacillus backii: AYR52_08220
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Entry
AYR52_08220 CDS
T04754
Name
(GenBank) transcriptional repressor CcpN
KO
K23774
DeoR family transcriptional regulator, catabolite repression regulator
Organism
lbt
Loigolactobacillus backii
Brite
KEGG Orthology (KO) [BR:
lbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lbt03000
]
AYR52_08220
Transcription factors [BR:
lbt03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
AYR52_08220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBS
HTH_11
HTH_DeoR
HrcA_DNA-bdg
HTH_PafC
CggR_N
HTH_24
GntR
HTH_Mga
HTH_5
LexA_DNA_bind
DAC
Motif
Other DBs
NCBI-ProteinID:
ANK60227
UniProt:
A0A192H302
LinkDB
All DBs
Position
complement(1747294..1747929)
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AA seq
211 aa
AA seq
DB search
MEFTKRQREIIEIVKNEQPISGNKIAQHLNLTRPTLRNDLSILTMTGMLDAKPKVGYFYS
GQHANPLTFETLYEVPVATVMLTPVLIKPTTTLQDAVTTLFMYDIGSLYVADDEQQLLGV
ISRKDLLRATLNTQDLTQIFASMIMTRMPNITTITAEDRILDAGYLLMSHQVDSLPVLAE
RSKKVVGKVTKTKIMQYFVEVGMKIEHEKYD
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
gtggaatttacaaaaaggcaacgggaaattattgagattgttaaaaatgaacaaccaatt
agtggtaataaaattgcccaacaccttaacttaacgcgaccaactctgcggaatgattta
tcaattttaacgatgacagggatgctagatgctaaaccaaaagtggggtatttttattct
ggtcaacacgctaatccgttaacttttgagacattatatgaagtgccagtagcaactgtg
atgttgacaccagttttaattaaaccgacaacaacactacaggatgcggttacgacgttg
ttcatgtatgacattggatcactctatgttgctgatgatgagcaacaattgttaggggtc
atttcgcgaaaggatctactacgggctactttgaatacgcaggatttaacacaaatcttt
gcgtcgatgattatgacccgaatgccaaatattacaacaattacggcggaggatcgaatc
ttagatgcaggttatttgctcatgtcgcaccaggttgattcattaccagtactggccgag
cgaagtaaaaaggttgtcggtaaggttactaaaactaaaataatgcagtattttgtggaa
gtcggaatgaagattgaacatgaaaaatatgattag
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