Loigolactobacillus backii: AYR52_10375
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Entry
AYR52_10375 CDS
T04754
Name
(GenBank) ATP-dependent helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
lbt
Loigolactobacillus backii
Pathway
lbt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lbt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AYR52_10375
09124 Replication and repair
03420 Nucleotide excision repair
AYR52_10375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbt03021
]
AYR52_10375
03036 Chromosome and associated proteins [BR:
lbt03036
]
AYR52_10375
03400 DNA repair and recombination proteins [BR:
lbt03400
]
AYR52_10375
Enzymes [BR:
lbt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
AYR52_10375
Transcription machinery [BR:
lbt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AYR52_10375
Chromosome and associated proteins [BR:
lbt03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
AYR52_10375
DNA repair and recombination proteins [BR:
lbt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AYR52_10375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
HBB
PhoH
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
ANK60620
UniProt:
A0A192GZ57
LinkDB
All DBs
Position
2228492..2230867
Genome browser
AA seq
791 aa
AA seq
DB search
MTTKIGVRELVEFVLRSGDLNARQNSQNTAAQGARIHRQLQKKHAADNYQREVYLKRTVH
MNGQDYVIDGRADGIYQTDKQNYRIEEIKTSDNDFGELTPNTLTLYWGQVKVYGYFLMED
QNLDEITLQLIYYQTTTEQITQTDKTFTKKELKDFFQSLIDDYEFWLVLREEWHQKRNAS
IKQVTFPFPEYRAGQRELAVAVYKTIVLQKRLFVEAPTGTGKTISTLFPAVKALGEDKIQ
RVFYLTAKQSTRHVAEEAVQLLSQQGLQLKSITLTAKDKIIFPEEVDVAPDKNPYMLGYY
DRLKPALQDLLENENQLTRTVIETYARKHQLDPFEFSLDASLFADVIICDYNYLFDPIVY
LQRFFSEPDKDNFFLIDEAHNLVSRSRDMYSAELTSGATSQLIQLAKEDHFAIEKDNLVK
QTRKLKRSFTAVTKELRDTKRAEETSQAPLDKFNNSLNHWLEFIHDWLPQQPDNSFTTAV
LNLYFSGLTYLKIADLYNETYQTLLQYDEATKLSTIKQLCLDPSAFLDQSLKKGAGAVLF
SATLSPVDYYQEVLGNDETSLAFQLPSPFSATKQAIMIAQYVQTTYQKRAANLTKIVMSL
GQLIQGKKGNYLFFFPSYSYLETVYAAFQTAYPDIELTKQVSAMTDLERQSFLAQFKESP
TQSLVGFCVLGGIFAEGIDLKGSRLIGVAIVSVGLPGLSTERNLVRDYFDHKNGAGFQYA
YQLPGMNHVLQAAGRLIRGSKDAGPVLLLDQRFGSSRYTKLFPSHWQRYQRVHTLEQLSK
SLHDFWQNNQS
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgacgactaaaattggtgttcgtgaactagtagaatttgttttgcgctctggcgattta
aatgcacgccaaaatagccagaatacggccgcccaaggtgcaagaattcaccgccaatta
cagaaaaaacacgcggccgacaattaccaacgagaagtttatttaaaaaggacagtacat
atgaacggccaagactacgtgattgatggccgggctgatggtatttatcaaacggataaa
caaaattaccggattgaggaaattaaaacgtcggataacgatttcggtgaactaacgccg
aatacgttgacactttattgggggcaggttaaagtttacggttattttttgatggaagat
caaaatctggacgaaattacgctgcaattaatttattatcaaacaacgacggaacaaatt
acgcaaacagataaaacttttacgaaaaaagaattaaaagatttttttcaatccttaatc
gatgattatgagttttggttagttttacgtgaggagtggcaccaaaagcgtaatgcaagt
atcaaacaggtgacctttccttttccggaataccgcgccggccaacgcgagttagcagtg
gccgtttacaagacgatcgtattgcagaaacgactttttgtggaggcgccaactgggact
ggtaaaactatttcaactctttttccggctgttaaagcactaggtgaggataaaattcag
cgcgttttttatttaacggctaaacaaagtacccgccacgtggcagaggaggcggttcaa
ctactaagccaacaagggctacagttaaaaagtatcactttgacggcgaaggataagatt
attttccctgaagaagtcgatgttgcaccggataaaaatccgtatatgctaggttactat
gatcgtttaaaaccagcactacaagatttgttggaaaatgaaaatcaactaacacgaaca
gtgattgaaacctacgcacgcaaacaccaacttgatccatttgaattttcgctggatgcg
tcattatttgccgatgttattatatgtgattataattatctttttgatcccattgtgtac
ttgcagcgtttttttagtgaaccagataaggataactttttcttgattgatgaagcgcac
aatttagttagtcgctcccgagatatgtactcggcagaattaacgagtggcgcaactagt
caattaattcaactagcgaaagaagatcatttcgcaattgaaaaagataatttggttaag
caaacgcgtaaattaaagcggtcgtttaccgctgtaacaaaggaattacgtgatactaag
cgcgctgaagaaacaagccaagcgccactggataaatttaataacagccttaatcattgg
ttagaatttattcatgattggttaccacaacagccagacaattcttttacaaccgccgtt
ttaaatctatattttagtggcctaacttatttaaaaattgctgatttatacaacgagact
taccaaacgttattgcagtatgacgaagcaactaaattaagtacgattaaacaattatgc
ctagatcccagtgcctttttagatcaatccttaaaaaaaggtgctggtgccgttttattt
tcggcaaccttatcgccagttgattattatcaggaggtgctaggtaacgatgaaactagt
ctagctttccaattaccttcacctttttcagcaactaaacaagcgattatgattgcccag
tacgttcaaacaacttatcaaaaaagagcggccaacttaactaaaattgttatgagctta
ggccaattgattcaaggaaaaaaaggtaattatttattctttttcccttcttattcgtac
cttgaaactgtctacgctgcttttcaaacggcctatccagatatagagttaaccaaacag
gtgtccgccatgactgatttagaacggcaaagtttcttggcccaatttaaagaatcgcca
acacaatcgttagttggattttgtgtactaggtggaatttttgcagaaggaattgattta
aaaggaagtcgcttaattggtgttgcgattgtgagcgttgggctaccaggactctcaact
gagcgtaatttagtgcgcgattattttgaccataaaaatggtgccggttttcagtatgcg
tatcaattaccaggaatgaaccacgtcttgcaggccgccgggcgattgattcgtggaagt
aaggatgctgggccagtgttgctgttagatcaacgttttggaagtagccgctatacaaaa
ctttttccaagtcattggcaacgctatcagcgtgttcatacattagagcagttatctaag
tcgttacatgatttctggcagaataatcaaagctga
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