KEGG   Loigolactobacillus backii: AYR52_10375
Entry
AYR52_10375       CDS       T04754                                 
Name
(GenBank) ATP-dependent helicase
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
lbt  Loigolactobacillus backii
Pathway
lbt03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lbt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    AYR52_10375
  09124 Replication and repair
   03420 Nucleotide excision repair
    AYR52_10375
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lbt03021]
    AYR52_10375
   03036 Chromosome and associated proteins [BR:lbt03036]
    AYR52_10375
   03400 DNA repair and recombination proteins [BR:lbt03400]
    AYR52_10375
Enzymes [BR:lbt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     AYR52_10375
Transcription machinery [BR:lbt03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     AYR52_10375
Chromosome and associated proteins [BR:lbt03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    AYR52_10375
DNA repair and recombination proteins [BR:lbt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     AYR52_10375
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 DEAD ResIII HBB PhoH Helicase_C
Other DBs
NCBI-ProteinID: ANK60620
UniProt: A0A192GZ57
LinkDB
Position
2228492..2230867
AA seq 791 aa
MTTKIGVRELVEFVLRSGDLNARQNSQNTAAQGARIHRQLQKKHAADNYQREVYLKRTVH
MNGQDYVIDGRADGIYQTDKQNYRIEEIKTSDNDFGELTPNTLTLYWGQVKVYGYFLMED
QNLDEITLQLIYYQTTTEQITQTDKTFTKKELKDFFQSLIDDYEFWLVLREEWHQKRNAS
IKQVTFPFPEYRAGQRELAVAVYKTIVLQKRLFVEAPTGTGKTISTLFPAVKALGEDKIQ
RVFYLTAKQSTRHVAEEAVQLLSQQGLQLKSITLTAKDKIIFPEEVDVAPDKNPYMLGYY
DRLKPALQDLLENENQLTRTVIETYARKHQLDPFEFSLDASLFADVIICDYNYLFDPIVY
LQRFFSEPDKDNFFLIDEAHNLVSRSRDMYSAELTSGATSQLIQLAKEDHFAIEKDNLVK
QTRKLKRSFTAVTKELRDTKRAEETSQAPLDKFNNSLNHWLEFIHDWLPQQPDNSFTTAV
LNLYFSGLTYLKIADLYNETYQTLLQYDEATKLSTIKQLCLDPSAFLDQSLKKGAGAVLF
SATLSPVDYYQEVLGNDETSLAFQLPSPFSATKQAIMIAQYVQTTYQKRAANLTKIVMSL
GQLIQGKKGNYLFFFPSYSYLETVYAAFQTAYPDIELTKQVSAMTDLERQSFLAQFKESP
TQSLVGFCVLGGIFAEGIDLKGSRLIGVAIVSVGLPGLSTERNLVRDYFDHKNGAGFQYA
YQLPGMNHVLQAAGRLIRGSKDAGPVLLLDQRFGSSRYTKLFPSHWQRYQRVHTLEQLSK
SLHDFWQNNQS
NT seq 2376 nt   +upstreamnt  +downstreamnt
atgacgactaaaattggtgttcgtgaactagtagaatttgttttgcgctctggcgattta
aatgcacgccaaaatagccagaatacggccgcccaaggtgcaagaattcaccgccaatta
cagaaaaaacacgcggccgacaattaccaacgagaagtttatttaaaaaggacagtacat
atgaacggccaagactacgtgattgatggccgggctgatggtatttatcaaacggataaa
caaaattaccggattgaggaaattaaaacgtcggataacgatttcggtgaactaacgccg
aatacgttgacactttattgggggcaggttaaagtttacggttattttttgatggaagat
caaaatctggacgaaattacgctgcaattaatttattatcaaacaacgacggaacaaatt
acgcaaacagataaaacttttacgaaaaaagaattaaaagatttttttcaatccttaatc
gatgattatgagttttggttagttttacgtgaggagtggcaccaaaagcgtaatgcaagt
atcaaacaggtgacctttccttttccggaataccgcgccggccaacgcgagttagcagtg
gccgtttacaagacgatcgtattgcagaaacgactttttgtggaggcgccaactgggact
ggtaaaactatttcaactctttttccggctgttaaagcactaggtgaggataaaattcag
cgcgttttttatttaacggctaaacaaagtacccgccacgtggcagaggaggcggttcaa
ctactaagccaacaagggctacagttaaaaagtatcactttgacggcgaaggataagatt
attttccctgaagaagtcgatgttgcaccggataaaaatccgtatatgctaggttactat
gatcgtttaaaaccagcactacaagatttgttggaaaatgaaaatcaactaacacgaaca
gtgattgaaacctacgcacgcaaacaccaacttgatccatttgaattttcgctggatgcg
tcattatttgccgatgttattatatgtgattataattatctttttgatcccattgtgtac
ttgcagcgtttttttagtgaaccagataaggataactttttcttgattgatgaagcgcac
aatttagttagtcgctcccgagatatgtactcggcagaattaacgagtggcgcaactagt
caattaattcaactagcgaaagaagatcatttcgcaattgaaaaagataatttggttaag
caaacgcgtaaattaaagcggtcgtttaccgctgtaacaaaggaattacgtgatactaag
cgcgctgaagaaacaagccaagcgccactggataaatttaataacagccttaatcattgg
ttagaatttattcatgattggttaccacaacagccagacaattcttttacaaccgccgtt
ttaaatctatattttagtggcctaacttatttaaaaattgctgatttatacaacgagact
taccaaacgttattgcagtatgacgaagcaactaaattaagtacgattaaacaattatgc
ctagatcccagtgcctttttagatcaatccttaaaaaaaggtgctggtgccgttttattt
tcggcaaccttatcgccagttgattattatcaggaggtgctaggtaacgatgaaactagt
ctagctttccaattaccttcacctttttcagcaactaaacaagcgattatgattgcccag
tacgttcaaacaacttatcaaaaaagagcggccaacttaactaaaattgttatgagctta
ggccaattgattcaaggaaaaaaaggtaattatttattctttttcccttcttattcgtac
cttgaaactgtctacgctgcttttcaaacggcctatccagatatagagttaaccaaacag
gtgtccgccatgactgatttagaacggcaaagtttcttggcccaatttaaagaatcgcca
acacaatcgttagttggattttgtgtactaggtggaatttttgcagaaggaattgattta
aaaggaagtcgcttaattggtgttgcgattgtgagcgttgggctaccaggactctcaact
gagcgtaatttagtgcgcgattattttgaccataaaaatggtgccggttttcagtatgcg
tatcaattaccaggaatgaaccacgtcttgcaggccgccgggcgattgattcgtggaagt
aaggatgctgggccagtgttgctgttagatcaacgttttggaagtagccgctatacaaaa
ctttttccaagtcattggcaacgctatcagcgtgttcatacattagagcagttatctaag
tcgttacatgatttctggcagaataatcaaagctga

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