Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365: LBUL_0693
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Entry
LBUL_0693 CDS
T00419
Name
(GenBank) RNase J1
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
lbu
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
Pathway
lbu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LBUL_0693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbu03019
]
LBUL_0693
Messenger RNA biogenesis [BR:
lbu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LBUL_0693
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_6
ODP
Motif
Other DBs
NCBI-ProteinID:
ABJ58319
LinkDB
All DBs
Position
complement(645182..646861)
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AA seq
559 aa
AA seq
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MKIKQNEVAVFAIGGLHEIGRNMYCVQYQDEIVIMDCGIKFPEDDLLGINYVISDYSYLV
KNREKIKALVVSHGHEDHIGGIPFLLEKIPEIPVYATPFALALIKSKCEEHGILDRTELH
EEHEDTVLTFDKLKVTFFRTTHSIPDTLGIAVHTPLGAVVFTGDFKFDLTPVMNQPAPNF
QRMAQLGEEGVLALLSDSTNAEVPQFTKSERFVAGSLHNIITGIEGRIIFATFASNLYRV
STAIQAAIDTGRKVAIFGRSMENGIQNGIDLGYLDVPEGLIVDAETINSLPPEKVMLLCT
GSQGEPLAALSRIANGTHRQIKLKPHDTVIFSSNPIPGNTLSVNQLINKLMEGGANVVHG
RVNNVHTSGHGGQEELKLMVELAKPKYMIPVHGEYRMQVVHAHLAQQAGVPAENTFVLKN
GEVVCFSPEGARIAGDIHVKDVFVDTSGADDVGNIVVRDRQILSEEGLVVAVATVDYKHK
RVLAGPDILSRGFVYMRESQDLINAAQKHVYHVLKTEMAKSDKPKDSEIRKAIIENLQDF
LYSRTERRPMILPMLVEKK
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
gtgaagattaagcaaaacgaagtagccgttttcgcgatcgggggattacacgaaatcggc
cgtaacatgtactgtgtccagtaccaagacgaaatcgtcataatggactgcggcatcaag
ttcccggaagatgatctgctggggatcaactatgttatctccgactactcttacctggtc
aagaaccgggagaagatcaaggccctggttgtcagccacggccacgaagaccacatcggc
gggattcccttcctgctggaaaagattccggaaattccagtctacgccacgccttttgcc
ctggccttgatcaagagcaagtgtgaagaacacggaatcctggaccggaccgagctgcat
gaagagcacgaagacacggttttgacttttgacaagctgaaggtgaccttcttcagaacc
acccactcaatccccgacactttggggattgccgtccacactccgctgggcgcggtcgtc
tttactggcgactttaagttcgacttgaccccggtcatgaaccagccggcccctaacttc
cagagaatggcccagctgggcgaagaaggcgttttggccctcttgagtgactcaaccaac
gccgaagtgccacagtttaccaagtctgaacgcttcgttgccggctctttgcacaacatc
atcaccggcattgaaggccggatcatctttgccactttcgcttctaacctttaccgggtg
tcaaccgccattcaagccgcgatcgacaccggccgcaaggtggcgatttttggccggagc
atggaaaacgggatccaaaacgggatcgacctgggctatctggatgtgccggaaggcttg
attgtcgatgctgaaacaatcaactccctgccgccggaaaaggtcatgctcctctgtacc
ggttcccagggtgaacccttggctgccctctcccggattgccaacggcacccatcggcag
atcaagttgaagccgcatgacactgtaatcttctcttccaacccgattccaggcaacacc
ttgagcgttaaccagctgatcaacaagctgatggaaggcggggccaacgtggtccacggc
cgggtcaacaatgtccacacttccggccacggcggccaggaagaactgaagctgatggtc
gaactggccaagcctaagtacatgatcccggtgcacggtgaataccggatgcaggttgtc
cacgcccacctggcccagcaagcaggcgtgccggcagagaacaccttcgtcttgaagaac
ggtgaagtggtctgcttcagtcctgaaggggccagaatcgccggcgacatccacgtcaag
gacgtcttcgtcgacacttccggtgctgatgatgtcggcaacatcgtggtccgcgaccga
cagatcctgtctgaagaagggctggtagtagccgtagccacggttgactacaagcacaag
cgggttttggcaggccctgacatcctaagccggggctttgtctacatgcgtgaatcccag
gacttgatcaacgcggcccagaagcacgtctaccatgtcttgaagacggaaatggccaag
agcgacaagcctaaggacagcgaaatccgcaaggcgatcatcgagaacctgcaggacttc
ctatactcccgtactgaaaggcggccaatgattctgccaatgctggtcgaaaagaaataa
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