Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365: LBUL_1190
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Entry
LBUL_1190 CDS
T00419
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lbu
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
Brite
KEGG Orthology (KO) [BR:
lbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbu03032
]
LBUL_1190
03400 DNA repair and recombination proteins [BR:
lbu03400
]
LBUL_1190
Enzymes [BR:
lbu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LBUL_1190
DNA replication proteins [BR:
lbu03032
]
Prokaryotic type
DNA Topoisomerases
LBUL_1190
DNA repair and recombination proteins [BR:
lbu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LBUL_1190
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
HypA
Motif
Other DBs
NCBI-ProteinID:
ABJ58721
LinkDB
All DBs
Position
complement(1094772..1096949)
Genome browser
AA seq
725 aa
AA seq
DB search
MPATAKEDKSKSSKKTTAAAKKSSPKRKKSKVKKDLVIVESPAKAHTIEKYLGRKYRVIA
SKGHIRDLPKSQMGVDIDHDYQPKYISIRGKGDTIKELKAEAKKANKVYLASDPDREGEA
IAWHVAHVLGLDEKEANRVTFNEVTKDAVKDAFNHARTIDMDTVNAQQARRVLDRLVGYS
LSPILWSKVKKGLSAGRVQSVALKLVIDREKEIKAFKPVEYWTIDAEFAKGKDKFQASFY
GEEGKKTELPNNEAVQKLLAKFDKKQPFTVSKVVKREVRRQPAAPFTTSTMQQEANRRLN
FRTSKTMNIAQHLYEGISLGKEGTVGLITYMRTDSKRISPVARQEAAQFIVEEYGSDFAV
KKERHFKNQGDAQDAHEAVRPTSVYRTPKSLEKVLTKDELRLYTLIWSRFVASEMTPAVF
DTVRYDLTQNGVTFRASGSVMKFAGYTKVYDNRSEKNVALPALEEGDEVKLTKSDNKQHF
TQPPARYTEASLVRALEENGVGRPSTYAPTIQNIQSRNYVKLEGRAIVPTELGEIVDGLV
EQFFPDITSVDYTAKLEDELDEVEEGKKDWVSVVDQYYKPFSKELEKADSEIQKIQIKDQ
PAGFDCEVCGAPMLVKMGRYGKFYGCSRFPDCRHTQTIVKKVGVTCPKCGEGEVLEKKSK
RGRKFYGCSRYPDCDFVSWDKPISRVCPHDGHFLVEKKRKDGMVVLCPNGDYKEEPREEQ
GEAAE
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctacagcaaaagaagataaaagcaagagtagtaaaaagaccacggcggctgcc
aagaagagcagcccgaagcggaaaaagagcaaggtgaaaaaagacctggttatcgtggaa
tctccagccaaggcccacactatcgagaagtacctgggccggaagtaccgcgtaatcgcc
tctaaagggcacatccgggacttgcccaagtcccagatgggggtcgacattgaccacgac
taccagccaaaatacatctccatccgggggaagggtgacaccatcaaggaactgaaggct
gaagccaagaaggccaacaaagtctacctggcttccgaccccgaccgggaaggggaagct
attgcctggcacgtggcccacgttttaggcctggacgaaaaagaagccaaccgggtaacc
tttaacgaagttaccaaggacgcagtcaaggatgccttcaaccacgcccggaccatcgat
atggacacggtcaacgctcagcaggcccgccgggtcttggaccgcttggtcggctactct
ttgtcgccgattctctggtccaaggtcaagaaggggctgtcagccggccgggtgcagtca
gttgccttgaagctggttatcgaccgggaaaaggaaattaaggccttcaagccggttgaa
tactggacgattgacgctgaatttgccaagggcaaggacaagttccaggctagcttttac
ggcgaagaaggcaaaaagacggaattgccaaataacgaggccgtccagaagctgctggct
aagtttgataagaagcagccgtttacggtcagtaaggtagttaaaagagaagtccgccgg
cagccagccgcgccgtttaccacttccaccatgcagcaggaagccaaccggcggctgaac
ttccggacttcaaagaccatgaacattgcccagcacctgtatgaagggatcagcctgggc
aaggaaggcacggtcggtttgatcacctacatgaggactgactccaagcggatctcacca
gttgcccgccaggaagcagctcagttcatcgttgaggaatacggcagcgacttcgcggtc
aagaaggagcgccacttcaagaatcaaggcgacgctcaggatgcccacgaagctgtccgg
ccgaccagtgtctaccggacaccgaagtccctggaaaaggttttgaccaaggatgagctc
cgcctttataccttaatttggagccgttttgtggctagtgaaatgactccggccgtcttt
gacacggtccgctatgacttgacccaaaatggggtgaccttcagagccagcgggtcagtt
atgaagtttgccggctacaccaaggtttatgacaaccggagtgaaaagaacgtggccctg
ccagccctggaagagggcgacgaggtcaagctgaccaagtcagacaacaagcagcacttc
acccagccgccggcccgttatactgaagccagcctggtccgggctctggaagaaaacggg
gttggccggccgtcaacttacgcgccgaccatccagaatatccagtctcggaattatgtc
aagctggaagggcgggcaatcgtgccaactgaactgggggaaatcgtcgacggcttggtt
gagcagttcttcccggacatcaccagcgttgactacacggccaagctggaagatgaactc
gatgaagtcgaagaaggcaagaaagactgggtcagtgtggttgaccagtactacaagcca
ttctccaaagaactggagaaagctgacagcgagatccagaagatccagatcaaggaccag
ccagctggctttgattgtgaagtctgcggggccccgatgctggtcaagatgggccgctac
ggcaagttctacggttgttcccgtttcccggactgccgccacacccagaccatcgtcaag
aaggtcggcgtgacttgtccgaagtgcggggaaggcgaagttctggaaaagaagtccaag
cggggccggaaattctatggctgttcccgctatccagactgcgactttgtttcctgggac
aagccgatcagccgggtctgcccgcacgacggccacttcctggtcgaaaagaagcgcaag
gacggcatggtcgtcctctgcccgaatggcgactacaaggaagagccaagagaagaacaa
ggcgaagcagccgaataa
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