Lentisphaerota bacterium zth2: JYG24_02330
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Entry
JYG24_02330 CDS
T10935
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lbv Lentisphaerota bacterium zth2
Pathway
lbv03030
DNA replication
lbv03430
Mismatch repair
lbv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JYG24_02330 (dnaE)
03430 Mismatch repair
JYG24_02330 (dnaE)
03440 Homologous recombination
JYG24_02330 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbv03032
]
JYG24_02330 (dnaE)
03400 DNA repair and recombination proteins [BR:
lbv03400
]
JYG24_02330 (dnaE)
Enzymes [BR:
lbv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JYG24_02330 (dnaE)
DNA replication proteins [BR:
lbv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JYG24_02330 (dnaE)
DNA repair and recombination proteins [BR:
lbv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JYG24_02330 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QSH41724
UniProt:
A0A974WX75
LinkDB
All DBs
Position
complement(561181..564744)
Genome browser
AA seq
1187 aa
AA seq
DB search
MSSDFVHLHLHTHYSLLDGACTVPGLIEMAKEYDMPAVAITDHGFMGGTIDMYQSFNKAG
LNPIIGCEAYVSPTTRFDKKASVPYIRGHHLVLLAKDITGYHSLCKLIAEAFNNGFFYKP
RIDKEILARHSEGLIGLSACIGGEIPAAILNNDFAAAEKAVGEYCDILGRDNFYLEVMDH
GMEEERRANKGIVELAKKMSLPVVATNDVHYLKKEHAKAHEIMLCIQTGSKIDDPKRFRF
PAPEFYFKSPDEMKEIFKEIPEAITVSREIAERCDIKFKFAPDVNHYPVYEISESGMGEK
EYLRNICMDGIVDRYDFDPRKLDSLDEKQQAIVDRMDFELGVIDGSKYCSYFLVVSDFIA
FARKEKIPVGPGRGSGAGSLVAYLTYITDIDPLKYNLLFERFLNPERVSPPDFDIDFCEK
RRSEVIEYVRNKYGHDSVAQIGTYGTLKAKAVIKDVARVLGRTFEEGDRITKLIPADPKM
NLAKARQESEDLRKMIDSEPYVQEIFKYAEVLEGINRQMGIHAAGVIIGDQRLDNLVPLA
RGAKSEVITEFPAVPCEELGLLKMDFLGLKTLTVIQHAVDNIRKHKPEFDIAKVSLEDPK
TFALLNRGDTVSVFQLESTGMQNLCRQFGVETIEHIIALIAIYRPGPMQFIPDFIARKKG
LAPIEYDHPKMEELLNETYGIMLYQEQIMQVVQELAGFTLGGADILRRAIGKKKVKVLQQ
QKVKFVEGCAEVSGIDEKLADIIWEKIGKFAGYGFNKSHSAAYAFIAYRTAYLKANYPVE
FMCAVLAAEIDNAEKIAFIIAECREMGIKILPPDINTSDINFSVDNGAIRFGLGAIKGCG
EAAAGKIIETREQEGRFESFLDFCERCGEAMNSRIIEHFTKAGAFDSLGLRRSQVLAIAE
PTMGYAASRVKDRLAGQGSLFDLLDDDAQEEICSIPIPDIPEFEENELLKNEKDLLGFYI
TGHPLAKYSEYISTYSTVKMLEIDSFADNVGIRFGGIVKSYSKRFSKNSGKPFGILELED
LDTSFEVMIYSRTLEALEESGFELEPDMPLFLEALTSKRDESERPRLIAERIIPIEQAPE
MYSAELHVHFYEGSNTSNDLEYIRAVCEKYPGEASLILCIACNGGEYAFLEAPGYKIKVN
TELLREISTKLGEKRYRLKANNKVPEARRRFNFKSRDKNEQEKTAAT
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgattttgtacatttacacctgcatactcattacagtctgcttgacggtgcc
tgcaccgtgccgggactgattgagatggcaaaggaatacgatatgccggcagtggcgatt
accgaccatgggtttatgggtggtaccattgatatgtatcaaagtttcaacaaagccggg
ctgaatccaatcatcggttgcgaggcttatgtcagccctaccacaaggtttgataaaaaa
gcatctgttccctacataagaggtcatcatctggtgttgttggccaaggacataaccggt
tatcattcattatgtaaacttattgctgaagcttttaataacggttttttctataaaccc
cgtattgacaaagagatacttgccaggcacagtgaaggtttgattggactgtcagcctgt
atcgggggagaaataccggccgcgattttaaataatgattttgcagctgctgaaaaggcg
gtcggcgaatactgcgatatccttgggcgtgacaacttttaccttgaggtaatggatcat
ggcatggaagaggaacgtcgggctaataaagggattgttgaactggctaaaaaaatgtca
ctgccggttgtagcgaccaatgacgtgcattatctcaagaaagagcatgccaaagcgcat
gaaatcatgctttgcatccagaccgggtcaaaaatagatgatcccaaacggttccgtttt
ccggcgcctgagttttacttcaagagtcctgatgagatgaaggagattttcaaggaaatt
cccgaggcgataaccgtttccagagagatagctgagcgctgcgatatcaagtttaaattt
gcccctgacgtcaaccactatccggtatatgagatcagcgaatccggcatgggagaaaaa
gagtatctgcgcaatatctgcatggacggcattgttgatcgctatgactttgaccctcgt
aagctcgattcgcttgacgaaaagcagcaggcaattgttgaccgcatggacttcgaactt
ggggttattgacggctcaaagtactgcagctattttctggtagtaagtgattttatcgct
tttgccagaaaagaaaaaataccggtagggcccgggcgtggctccggtgccggcagtctt
gtggcatatttgacttatattactgatatagatccgctgaagtacaatctgctcttcgaa
cgatttctgaatccggaacgggtgagccctcctgactttgatattgacttttgtgaaaaa
aggcgttcagaggtaattgagtatgtccgtaataaatacggacatgacagtgtggcgcag
attggaacctacggcaccttgaaagccaaagccgtaatcaaagatgtcgccagagtgctt
gggcggacctttgaggaaggggacagaattacaaagttaatccccgccgacccgaaaatg
aacctggcaaaggcccgtcaggaatctgaagacctgcgaaaaatgattgattcagagcct
tatgtccaggaaattttcaaatatgctgaagtacttgaaggcattaatcgccagatgggg
atacacgctgccggagttattatcggtgatcagcgtctggataacctggttccgctggca
cgtggagccaaaagcgaggttataacagaatttccggctgtaccgtgcgaagagcttggc
ctgttgaaaatggatttcctcggccttaaaaccctgactgtaattcagcatgccgtagat
aatatccgcaagcataaaccggaatttgacatagcaaaagtgagtcttgaggaccccaag
acttttgctttactgaatcgtggggatacggtttcggtatttcagcttgaatctactgga
atgcagaatctgtgccgccaattcggggtggagaccattgagcatatcatcgccctgatt
gcgatttatcgtcccggcccgatgcagtttattcctgatttcatcgcccgcaaaaaaggt
ctggcgccaattgaatatgatcatcccaagatggaagagcttcttaatgaaacttacggc
attatgctttatcaggaacagatcatgcaggtcgtgcaggagttagccggatttactctt
ggtggcgccgacattctgcgccgggcgatcggcaagaaaaaagtgaaggtattgcagcag
cagaaagtcaagtttgtcgagggatgtgctgaggtgagtggtatcgatgagaaacttgct
gatatcatctgggaaaaaatcggcaaatttgctggctacggttttaataaatctcacagt
gccgcctatgcatttatagcgtaccgcactgcgtatttgaaagccaattatccggttgaa
tttatgtgtgcagtgctggcggcagaaattgacaatgctgaaaaaatcgcctttatcatt
gccgaatgtcgcgaaatgggtattaaaattctaccgccggatatcaacaccagcgatatt
aatttttcggttgacaatggtgcaatccgtttcgggctgggagcaataaagggctgcggt
gaagctgctgccggcaaaattattgaaacccgtgaacaggaaggccggtttgaaagtttc
cttgacttctgtgagcgctgtggtgaagctatgaattcaaggatcattgagcactttacc
aaagccggagcatttgactctctgggactcaggcgttcgcaggttctggccatagctgaa
ccgacaatgggctatgcggcttcaagagttaaagaccggcttgcggggcaggggtcattg
tttgatctgcttgatgatgacgcccaggaggaaatctgttcgattccgattccggatatt
ccggaattcgaagaaaatgaactgcttaaaaatgaaaaggatctgctgggtttctatatc
accggacatccgctggcaaaatattctgagtatatttcaacttattcaacagtaaaaatg
ctggaaattgactcctttgcggataatgtcggtatcaggtttggcggtatcgtaaaatct
tacagcaaacgcttcagcaagaacagcggcaagccgtttggtattcttgagcttgaagac
ctggatacctcgtttgaggttatgatatacagcaggacgttggaggcgcttgaagaaagt
ggatttgagctggaaccggacatgccgttattccttgaagccttgaccagcaaacgagat
gaatcggaaagaccgcgtttgatagctgaacgcattattccgatagaacaggctccggaa
atgtactctgctgaactgcatgtgcatttttatgagggctcaaacaccagcaatgatctt
gagtacatccgtgctgtctgcgaaaaatatcccggtgaagcctcactgattttgtgcatt
gcctgcaacggtggggaatatgcttttcttgaagcacctggatacaagatcaaagtcaat
acagaactgcttcgtgaaatcagcactaaacttggtgaaaaacgttatcgtctgaaagcc
aacaacaaggtgcccgaagctcgccgccggttcaatttcaagtctcgagacaagaatgaa
caggagaaaacagcagcgacctga
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