Lentisphaerota bacterium zth2: JYG24_03580
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Entry
JYG24_03580 CDS
T10935
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lbv Lentisphaerota bacterium zth2
Pathway
lbv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JYG24_03580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbv03019
]
JYG24_03580
03400 DNA repair and recombination proteins [BR:
lbv03400
]
JYG24_03580
Enzymes [BR:
lbv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JYG24_03580
Messenger RNA biogenesis [BR:
lbv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JYG24_03580
DNA repair and recombination proteins [BR:
lbv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JYG24_03580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RQC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QSH41964
UniProt:
A0A974WXQ2
LinkDB
All DBs
Position
complement(871805..874135)
Genome browser
AA seq
776 aa
AA seq
DB search
MHNYTRAALKEYFGFDSFLDNQEDIVNEVLAGDDLCVIMPTGAGKSLCYQLPILMNPGYG
IIVSPLISLMKDQVDALRGRGIPAAYINSTVSQPEQQRLMREAAIGDIKLLYVAPERFTT
SSFQHLLSHQPPSTMIVDEAHCISQWGHDFRPSYMRLGEALDQYEIPQICAFTATATPKV
REDICTMLRRPDMRLHVAGFKRPNLAFSVLDCPGNEQKNRAIAGLLESPCPTIIYASTRK
AVEQISKEFDCIAYHAGMTDEDRSRAQEDFMTESCPVLVATNAFGMGIDRPDVRRVIHYN
LTGSLEAYYQEAGRAGRDGEPAECILLYSYSDRFVQQFLIDLSNPSEELLRGLYKALLEL
WHKTGGNSLEIKLSDLVELIPQAKSDNQLSSAMRILEKHGYIARGFRQQNTGMLRFEEDL
ETLSNRHYAQSTQRSRFIARCINHFGSQIKVFQECSYEQLAHIAGLNIEQIKRVLRALDG
DCLKWQPPFAGRSTELLKPETAELQIDFEVLNKKRDFETARLDEVISYTNSGQCRQRFLI
SYFGEDTEAWNCENCDICNGGSAAGVPEREPSDLEKGYIKRILTTVKKFDGRFGRGRISQ
VLAGARRPEIVDWGLDRSSEFGSMKGVSQNNILLYMKALEKLDCISKVGDPKYPCIDITP
FGMEVLMGYENILLDFPEVKTKKASRKKKKAEPRKEFAGGGNDLYERLRKLRFEMAGDQQ
VPPFQILTNAALEGLVEATPVTPAEALKIKGVGPRKVKTVIPRFLDEIQDWRRDFG
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgcacaattatacacgggctgccctgaaggaatactttggatttgattcttttctggac
aaccaggaggatattgtaaatgaagttctggcaggtgatgatctttgtgtcattatgccg
accggggctggcaaatctctctgctaccagttgccaatactgatgaatcctggttacgga
ataatagtatctccgctgatatcacttatgaaagaccaggtggatgcgctgcggggcagg
ggaattcctgccgcctacatcaacagcacggtttcgcagccggagcagcagcgcctgatg
cgggaagcggcgattggagatattaagctgttatatgtagcaccagaaaggtttaccacc
agctcgtttcagcacctgctttcgcatcaacctccaagtaccatgattgtagacgaagct
cattgcatcagtcagtgggggcatgattttcgtccttcctacatgcggctgggcgaagcg
cttgaccagtatgaaattccccagatttgtgcttttacggctaccgcgacgccaaaggta
cgcgaggatatctgtactatgctgcgtcgaccggacatgcggctgcatgtggccggtttc
aagcgaccgaatctggcgttttcggtgctggactgccccggtaatgagcagaaaaaccgg
gctattgccggtttgctggagagtccctgtccgacaataatatatgcttcgacccgtaaa
gcggttgaacagatatcaaaagagtttgactgtatagcctatcatgcaggaatgactgac
gaagaccgcagccgggcacaggaggactttatgactgaatcatgcccggtactggtggcg
acaaatgcttttggaatgggtattgaccgtcccgatgtacggcgggtgattcactacaac
cttaccgggtcactggaggcatattatcaggaggcgggacgtgccggaagagatggagag
cccgctgaatgcattctgctttactcatacagtgatcgttttgtacagcaattcctgatt
gacttaagcaatccgtctgaggagttgctgagggggttgtataaggcattgcttgagctg
tggcacaagactggcggcaacagcctggagataaaattatctgacctggtggaattaatt
ccgcaggcaaaatctgataaccagttgagcagtgcgatgcggatactggagaagcacggt
tatattgcccgtggtttcaggcagcagaataccgggatgcttcgttttgaggaggacctc
gaaacgctcagcaatagacattatgcccagtctacgcagcgttcacgcttcatcgcacgc
tgcattaaccatttcggatcacagataaaggtttttcaggaatgttcttatgaacagctg
gcgcacatagctggactcaatattgaacagattaaacgggtactaagagcacttgacggg
gattgtttaaaatggcagccgccatttgcgggcaggtcaactgaattgctgaaaccggaa
acagcggaactgcaaattgactttgaggtgctgaataaaaagcgtgattttgaaacagcc
cggcttgacgaggtaatcagctatactaacagcggtcaatgccggcagcgctttctgata
tcatattttggcgaagatactgaagcatggaattgcgagaactgcgatatctgcaacggc
ggatctgcagccggggtaccggaacgcgagcccagtgacctggaaaagggctatattaaa
agaatccttaccacggttaaaaagtttgacggccgttttggccgcggccggataagccag
gtgctggcgggagcacgccgccctgagattgtggactggggacttgaccgcagttctgag
ttcggcagcatgaagggggtaagccagaataatattctattgtatatgaaggcccttgaa
aaacttgactgtatctccaaggttggtgaccccaagtatccatgtattgacataactcca
ttcggcatggaggttttgatgggatatgagaatatcctgcttgattttcctgaagtcaag
acaaagaaagcttcccgaaaaaagaaaaaagctgaaccccggaaagagtttgctggcggt
ggtaatgatctttatgaacgattgcgtaagctgcggtttgagatggctggagatcagcag
gtccctccttttcagatattgaccaacgccgcattggaaggtctggtggaggctacgcct
gtcaccccggcggaagccttgaaaattaaaggcgtcggtccccggaaagttaaaactgta
attccacgttttcttgatgaaatacaggactggcgccgtgatttcggctga
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