KEGG   Lentisphaerota bacterium zth2: JYG24_04415
Entry
JYG24_04415       CDS       T10935                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
lbv  Lentisphaerota bacterium zth2
Brite
KEGG Orthology (KO) [BR:lbv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lbv02044]
    JYG24_04415 (tssC)
Secretion system [BR:lbv02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JYG24_04415 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: QSH42119
LinkDB
Position
1074647..1076170
AA seq 507 aa
MLQLVEKNKKNFEWLISPLDIDRRVFFNHNISINTISSAELVSPREDTPAYYGLLILLAN
IDSRCQIERGFDKSITQKIINRIDIMLNRQINEIIRNKTFRELESNWLGISDLVSSTDFD
ANIKVDLLDITKQELMLEFELNSVDISNSELFKKVYFAEYDQFGGKPYASLLGLYDFSNT
PEDISFLSMIGKISASCHAPFIGAVAAGFFGIKKIRDLLEIKDINGLLKHPRYRRWNHLR
NTEQSTYLGLTLPHYLVRAPWHPDTNPAENGLRGFIEDVSPDKDSNYVWAPATLLLAKNL
TRSFKYYGWCQHIKGETGGGLLKNLPMHIFNTRGKQERKSPVECIIPEYYERLLSNAGLI
PLIYKKNTSDACFFNVRSLKEIHSYKDTSDTKNSIMYGNLAYTFSASRIAHYIKEVGRLN
VGVNSDAKHISNILNRWINQYVTEIKNPDANTLAFYPFKKANVKIETAEGQLGWYRCKFS
VLPHVQFEGADTLMTLNTKINTSYIHR
NT seq 1524 nt   +upstreamnt  +downstreamnt
atgctgcagctagttgagaaaaacaagaaaaattttgagtggctcatcagcccgcttgat
attgatcggcgagttttcttcaatcacaatatcagcatcaatacaatcagctcagctgaa
cttgtttccccccgggaagatactcccgcatattacggcctgcttatactgcttgctaac
attgactcaagatgccaaattgaacgtggttttgacaaatcaattacccagaagatcatt
aaccgaattgacatcatgctcaatcggcaaattaatgaaattatcagaaacaagactttc
agagaacttgaatccaactggcttggcatctcagacctcgtttcaagtactgactttgat
gcaaatatcaaggtagaccttctagacatcaccaagcaggaattaatgcttgaatttgag
cttaacagtgtagatatttcaaattctgagctgttcaagaaagtatactttgctgaatac
gaccagtttggcggcaaaccttacgcctcattactggggctttatgacttcagtaataca
cctgaagatatcagctttttgagcatgattggtaaaatttccgcatcatgtcatgcccct
tttatcggcgctgtagctgctggtttcttcggtatcaaaaagatccgggacctgcttgaa
ataaaagatataaacggtcttttaaaacaccccagatatcgccggtggaatcacctgaga
aacacggaacagtcaacttatctcggcctgactctgccacattacctggtccgtgcgccc
tggcatccggacacaaaccctgctgagaacggtttgcgcggctttattgaagatgtatcc
cctgacaaagattcaaactatgtatgggctcccgcgacactgctattggcaaaaaatttg
acccgctcattcaaatactatggctggtgtcagcacattaaaggagaaaccggtggcggt
ttactgaaaaacctgccaatgcatattttcaacaccagaggaaagcaagagcgtaaatca
cctgttgaatgtattattcctgagtattatgaacgcttattgtccaatgcagggcttatt
cctcttatttacaaaaagaatacgtcggatgcgtgttttttcaatgtcaggtcgcttaag
gaaatacactcttataaagacaccagcgatactaaaaattcaatcatgtacggaaacctg
gcttatactttttctgcttccagaattgcgcattatataaaggaagtcgggcggcttaat
gtcggagttaactctgatgcaaaacatatctcaaatatccttaaccgttggataaatcag
tacgtaaccgaaattaaaaacccggatgcaaatactttagctttttatccgttcaagaaa
gccaatgtaaaaatcgaaactgctgaaggacaactgggctggtaccgctgcaagttctct
gtactgccgcacgtccaatttgaaggtgcagatactttgatgacacttaacactaaaata
aatacatcttatatacacagatag

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