Lentisphaerota bacterium zth2: JYG24_04535
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Entry
JYG24_04535 CDS
T10935
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
lbv Lentisphaerota bacterium zth2
Pathway
lbv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JYG24_04535 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbv03400
]
JYG24_04535 (uvrB)
DNA repair and recombination proteins [BR:
lbv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JYG24_04535 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JYG24_04535 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_3rd
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_16
P-loop_SecA
AAA_22
GHMP_kinases_N
EAD9
Motif
Other DBs
NCBI-ProteinID:
QSH42143
LinkDB
All DBs
Position
1108100..1110136
Genome browser
AA seq
678 aa
AA seq
DB search
MSLFKLVSKFKPSGDQPEAIQALLEGFSKGRSCQTLLGVTGSGKTFTLANTIAQLDRPVL
VLSHNKTLAAQLYSEFKSFFPDNAVEYFISYYDYYLPESYIPQTDTYIAKDASINENIEK
LRLSATTSLLERKDVIVVASVSCIYGLGSPEDYEHMCVPVKVGDNIGRDALLRGLVNIQY
ERNDTAPEKGQFRVRGDTVDVFEPQREEFVRVEFWGDEVEAISRHIVVSGKIKNRTDKVM
FFPCKHFVMPPERIEAAVTGITEEMKKQVEYFESKGLLVEAQRIYQRVNYDLEMIREIGY
CSGIENYSMYLSNRQPGSRPFCLFDFFPDNMITVIDESHATLPQLRAMYRADRSRKQTLV
EHGFRLPSALENRPLKFDEFENLHNDCIFVSATPGDYEIEHGGAPIEQVIRPTGLLDPVV
EIRPLEGQVDDVIHEIREASKRHERVLVTTLTKKSSERLSDYLCDLGIRCSYLHSELDAL
ERVRVLSQLREGRYECVIGINLLREGIDLPEVALVAILDADKEGFLRSERSLFQVSGRAA
RNQAGKVILYADNVTPSIRKLVDTTKERRKKQKAYNKTHNITPKTIEKPRSITINDAVAM
ESGVKYSTADAVSTVFEVNESNVDFGSNQVKNLKPNELQELIRELEEEMMNAAESLEFER
AADLRDRIKMISSDRFVK
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgagtctctttaaactggtatcaaaattcaagccttccggagaccagcccgaagcgata
caagccctgcttgaaggattcagcaaaggcaggtcctgccagactctgcttggtgtaacc
ggttccgggaaaacctttacgctggctaataccattgctcagcttgaccgcccggttctg
gtgctctcccacaacaaaaccctcgcagcccagctttacagcgaattcaaatcgtttttc
ccggataacgcagttgaatactttatcagttattacgattattatctgccggaatcatac
ataccgcaaaccgacacttatatagccaaagacgccagtatcaatgaaaacattgagaaa
ctgcggttgtcggccacgacatccctgcttgaacgcaaggatgtcattgttgtcgccagt
gtttcatgcatatacggtttaggctcgccggaagactatgagcacatgtgtgtgccggta
aaagtcggcgataacattggtcgcgacgcattgctgcgcggactggtcaatattcaatat
gagcgcaatgacaccgctcctgaaaaagggcagtttcgggtcaggggtgacactgtagat
gtcttcgaaccgcagcgcgaagaatttgtccgggttgaattctggggagatgaagtagaa
gccatatcgcgtcatatcgtggtcagcggaaaaataaaaaaccgcactgacaaagtcatg
tttttcccgtgcaaacatttcgtcatgcctccggaacgaattgaagccgctgtaaccgga
ataaccgaagaaatgaaaaaacaggtggaatatttcgaaagcaaaggcctgctggtcgaa
gcccagcgtatttaccagagggtaaattatgaccttgaaatgattcgtgaaatcggttac
tgctccggtattgaaaattactcaatgtacctgtccaaccgccagccgggaagccgcccg
ttctgcctgtttgacttttttccggataatatgatcaccgtcattgatgaatcccatgcc
acgctgccgcagctgcgtgccatgtaccgggcagaccgcagccgcaaacagactctggtc
gaacatggcttcagactgccgagcgcgcttgaaaaccgaccgttaaaatttgatgaattc
gaaaatctgcataacgactgtatttttgtctcggctactccgggtgattacgaaattgaa
cacggcggcgcaccgattgagcaggtaatacgacctaccggtctgctcgatccggttgta
gaaatacgcccgcttgaaggccaggttgatgatgtcatccacgaaataagggaagcttca
aaacgccatgaacgggttctggtgacaaccttgacgaaaaaaagttcagaacgcctttcc
gattatctctgcgatcttggcattcgctgcagctacctgcattctgaacttgacgcgctg
gagagagtcagagtgctttcgcagctgcgggaaggcagatacgaatgcgtcattggcatt
aacctgctacgggagggaatcgacctgccggaagttgcgctggtggctatccttgatgca
gacaaagagggattcctgcgttcggagcgttccctgtttcaggtctcaggacgcgctgcc
agaaaccaggcaggtaaagttattctctatgccgacaatgtcactccaagtattcgtaaa
ctggtggatacgactaaagagcggcgtaaaaaacagaaggcatataataaaacacataat
attaccccaaaaactatcgaaaagccgcgcagcatcaccataaatgacgctgttgccatg
gaaagcggtgtgaagtattctaccgccgacgctgtttcaactgtttttgaagtaaatgaa
tcaaatgtcgatttcggctccaatcaggtaaaaaatttaaagccgaatgaactgcaggaa
ttaataagggaacttgaagaggagatgatgaatgcggctgaatcactagaatttgagcgg
gccgctgatcttcgtgaccgaatcaaaatgatctcatcggatcgctttgtaaaataa
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