Lentisphaerota bacterium zth2: JYG24_06900
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Entry
JYG24_06900 CDS
T10935
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
lbv Lentisphaerota bacterium zth2
Pathway
lbv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JYG24_06900 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbv03019
]
JYG24_06900 (rny)
Messenger RNA biogenesis [BR:
lbv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JYG24_06900 (rny)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
FUT8_N_cat
DUF7669
Motif
Other DBs
NCBI-ProteinID:
QSH40012
UniProt:
A0A975A6U2
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Position
complement(1651088..1652632)
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AA seq
514 aa
AA seq
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MTIYIIMGVGGAIAGFVVAALLQKMQKASAGQLAVKIREDAEKEAEHIKREAKVTAKGEV
LKMREEVEDELQQRRKEQLSVEKRLSQREENLERKADAFEKREENFSRKEKEIDSLRDRL
SNREQELQKSISKQIDELERIALLDRESAKEILLEKLKNEVKNESGLLVRDVLEEAKQKS
EKEARRILTYAIQRYASDCTYDRTTATIPLPGDEMKGRIIGREGRNIRAIEAATGVNILI
DDTPEAVVISCFDPVRKEVARQLMERLIADGRIHPTRIEDQTKKIAKEVEEEIFSTGEAA
VLETGIQGVSPHIIKLLGRLKYRYSFSQNVLQHSLEAAYFMGIIASELGLDEQKAKRIGL
FHDIGKAVDHEVEGSHAAIGADILRKHNEAQDVIHAVAAHHEDVDAASIYDILINACDTL
SASRPGARSETTELYLKRLEQLEDIAHSFNGVESCFALQAGREVRVVVNPVKIKEGEAQI
LAKDICQRIEKEMNYPGQIKVSIIRETRSIDYAK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgacaatttacatcatcatgggtgttggtggcgctatagcaggctttgtcgtagctgct
ttactgcagaaaatgcagaaggcctcggcgggacagctcgctgtcaagataagagaggac
gcggaaaaagaagctgagcatattaagcgcgaagctaaagttactgctaaaggggaagtt
ctcaaaatgcgtgaagaggtagaagatgaactgcaacagcgccgcaaagagcagctgtct
gtagaaaaacgcctctctcagcgcgaagaaaatctggaaagaaaagcagatgcctttgaa
aaaagggaagagaacttttcccgtaaggaaaaagaaattgattccttgcgtgacagactt
tcgaatcgtgaacaggaattgcagaaaagcatttcaaaacagattgatgaactggaaaga
attgcacttttagaccgtgaaagcgctaaggaaatactgcttgaaaaattaaagaatgaa
gttaagaatgaatccgggcttttagtccgtgatgttcttgaagaagccaagcagaagtca
gaaaaagaagcgcgtcgtattttgacgtatgccatacagcgttatgcatctgactgtaca
tatgatcgaactacggccactattcctttgccgggagacgaaatgaaaggtcgcattatc
ggcagggaagggcgtaatatacgggcaattgaggcggctacaggagttaatatacttatt
gacgatacacctgaagctgtagttatctcatgctttgacccggtccgtaaagaggttgcc
agacagctgatggaacgcttgattgctgatggcaggattcatcctacccgtatcgaagac
cagaccaaaaaaatcgccaaggaagttgaagaggagatcttcagcaccggcgaagctgcc
gttctcgaaaccggcatacagggagtttctccccatataatcaagctgctcggacgcttg
aaataccgttacagtttttctcagaatgtgctgcagcattcacttgaagcagcgtacttt
atgggtataattgcatcggaactcggtcttgatgaacagaaagccaaaagaatcgggctc
tttcatgatattggtaaagcagttgatcatgaagttgaggggtctcatgccgcgattggt
gctgatattctgcgcaagcacaatgaagcccaggatgttatccatgcggttgccgctcat
catgaagatgttgatgctgccagcatttatgatattcttataaatgcctgtgatactttg
agtgcatcccgtcctggagcccgtagtgaaactactgaactttacctgaagcggcttgag
cagcttgaggatattgctcacagtttcaacggggttgagtcctgttttgctttacaggct
gggcgcgaggtcagggtagtcgtcaatccggtcaaaatcaaggaaggcgaagctcagata
ctggctaaggatatatgtcagagaattgagaaagagatgaattatcctgggcagatcaag
gtgtctataattcgtgaaaccagatcaattgattatgctaagtaa
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