Lentisphaerota bacterium zth2: JYG24_07795
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Entry
JYG24_07795 CDS
T10935
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
lbv Lentisphaerota bacterium zth2
Brite
KEGG Orthology (KO) [BR:
lbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lbv03000
]
JYG24_07795
Transcription factors [BR:
lbv03000
]
Prokaryotic type
Helix-turn-helix
Other families
JYG24_07795
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
Mg_chelatase
AAA
HTH_22
MCM
PAS_9
PAS_8
HTH_7
AAA_3
HTH_psq
HTH_30
AAA_16
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
QSH40173
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Position
1840907..1842862
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AA seq
651 aa
AA seq
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MGMTRQDWKDFTESGVIPQTFPKIVESWINCRKAGLDYSAQPRLSGCAQPPVAEWYKHVK
NHAIGLLDTLGANVMIGALLCDACGEVLEIITIYDEVRKQLAAAGIRNNTLLSEKSAGTN
AVSICMTNKTRLGCVGTDHYLQKLHCLSGWAAPLFDSDGELNGYIAFYGSAAAVPSRLLL
LMTGWFITLHDYSYRLKNIMRIHNTVRKNFNVVFNESQRPMLTVTKTGRLRNINPAALKL
LQLTGKQIDEREVDSFARFSPRIKDIVKTANPASNCPLIIRLKQRELTVKFERLPVFSDK
DEFLGCQLILDEEKQQRKSIEAFPQAKYTFKDILGKSPTLLLAKEHAALAAETSVNVFLH
GPSGTGKEMFAQSIHNASERCDKPFIAINCAAIPRDIAESELFGYAEGAFTGASKRGKSG
KLAAADTGTVFLDEIGDMPFELQAKLLRLLEEKTISPVGSSKEVTVDIRVIAASNRDIQE
LIAAGKFREDLFYRLNVTSINLPSLQESILDVPVLVNHFLTHFNEVMGKEIPDLEPSVME
HFKSYKWPGNIRQLKNAIEFAVMLNTNGDNISWKHLPGELRTALLYQKPQDISPMDPFIK
EREEIHNSEKALYEKAILTCRGNMSKAAIFLDISRSTLYRKLKKYNIPVER
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgaccagacaggactggaaggactttactgaaagcggtgttattccgcaaacc
tttcctaaaattgttgaaagctggatcaactgtcgtaaagccgggctggattactcagct
cagccccgtttgtccggctgtgcccagccacctgttgctgaatggtataagcatgtgaaa
aatcacgcgataggcttacttgataccttaggtgcaaacgttatgatcggcgcactgctg
tgcgatgcctgcggagaagtgcttgaaattataacaatttatgatgaagtcaggaagcaa
ctggcagccgcaggaataagaaataatactctgctttcagaaaaatccgccggaactaac
gctgtaagtatatgcatgacaaataaaacccggcttggctgtgtcggaaccgaccattac
ctgcagaaactgcactgtctgagcggctgggcagcaccgttattcgattcagacggagaa
ctcaacggttatattgccttttacggttcagctgccgccgtaccatcaagactgctcctg
ctcatgaccggatggttcattaccctgcatgattacagttacaggctcaaaaatattatg
cggatacataatacagttcgtaaaaacttcaatgtcgtttttaatgaaagccagcggcca
atgctgaccgttacaaagaccggccgcttgcgtaatatcaatcctgcagccttgaaactt
ttgcaactgacaggaaaacagattgatgaaagagaagttgactcatttgcccgtttttcc
cccaggataaaagatattgttaaaactgccaacccggcaagcaactgtcctttgattatc
aggcttaaacagcgggaacttacggttaaattcgagcgacttcccgtattcagcgacaaa
gatgagtttctgggctgtcagcttattctggatgaagaaaagcagcaacgcaaaagtatt
gaagcttttccccaagccaaatatacatttaaagatatcctgggcaaatccccgactttg
ctgctggccaaggaacatgccgctttagccgcagaaacctcagtcaatgtctttctgcac
ggtcccagcggcaccggcaaggaaatgtttgcccagagtattcataatgccagtgaacgc
tgcgataaaccgtttatagccatcaactgtgctgccattccgcgggatattgccgaaagc
gaactatttggctatgccgaaggcgccttcacgggagcaagcaagcgtggcaaaagcgga
aaacttgcagcggccgacaccggcactgtatttctcgatgaaatcggggatatgccgttt
gaactgcaggcaaaactgcttcgacttctggaagaaaaaaccatttccccagtcggcagc
tcaaaggaagttactgtagatatcagagtgattgccgccagcaatcgtgatattcaggag
ctgattgcggcgggaaaatttcgggaagacctgttttaccggttaaatgtgacttcaata
aacctgccttcgctacaggaaagtattttggacgtcccggtactggtcaatcatttcctc
acgcatttcaatgaagttatgggcaaggaaatcccggacctggagccatctgtcatggag
cacttcaagtcctacaaatggccgggcaatatccggcagctcaaaaatgccatcgagttt
gctgtaatgctgaacaccaacggggataatatcagctggaaacacctgcccggtgaactt
cgtacggcacttttataccagaaacctcaggatatttctccgatggatccctttataaaa
gaacgtgaggaaatccacaacagcgaaaaagctctctatgagaaagcaattttgacttgc
agaggcaatatgagcaaggctgcgatttttctggacatcagccgcagtaccctgtaccgt
aagctgaaaaaatacaatattccggtggaacgctga
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