Lentisphaerota bacterium zth2: JYG24_12145
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Entry
JYG24_12145 CDS
T10935
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
lbv Lentisphaerota bacterium zth2
Pathway
lbv02024
Quorum sensing
lbv03060
Protein export
lbv03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lbv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
JYG24_12145 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JYG24_12145 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JYG24_12145 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lbv02044
]
JYG24_12145 (secD)
Secretion system [BR:
lbv02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
JYG24_12145 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
MMPL
ACR_tran
SecD_1st
Sec_GG
Motif
Other DBs
NCBI-ProteinID:
QSH40994
LinkDB
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Position
2845884..2848487
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AA seq
867 aa
AA seq
DB search
MNKRPVILRSLIALVVIAVFFISIHPLTQRDFYETFKSLLKNSKNPVAAKLVREAKESQA
KDPSMYATTALLNAANKNGVELKTLVNGKDLQVNSDVISLVRKKASSSIRLGLDLNGGVE
FMLELVPDENFLNSIKKEVKNDKNAQAQYEKRLTTEFNRYRDIAIETLRSRMEAQKIYEA
EITPAGGRYISLKVPVVSKEEKLKLLRLIKMSAKLRFRFVNPDNEKLVQQYLAGPKKFRS
PIGFDLMKIKEFRSGKKELTRYYFVNKRWAMDGKSIIDAYPTKDQFGQRKIILKFNSAGA
ERFGEITSKNKGRQLAIVLDDKLYCAPVIRDAITTGSAEISGNFSNEEAKNISDALVSGS
LPFQIRVEGIFDTDPTLGVANVQNGIWAGIFALAIVMAFMIFYYLRAGVVAVIALGVNII
LVLGALAAFDATLTLPGIAGIILTIGMSVDANVLIFERIREELERKKSLQTAIELGYSRA
FITILDSNLTTLFTALILMRVGTGPVKGFAVTLSIGILTSMFTALFLTRLIFDYIDRVHP
FKGMKMLTFVRNPKIDFVGLRKYAFTLSGVLIVASLLVFGAKGKTMFGVDFTGGTQITFD
YQKRVPVNKVEDTLKKAGYEAQVSYKTSASQVDNKKVEILIRKNIKLEKTGSGEAVSPKE
QIAGMLNKTYPASKFSGGQETSIGGLVGYEFTKSALLAIGLAFLGIIIYISIRFEFAYAI
ASIIALIHDVIVATGIFVACGNEVSLSVVAAILTIIGYSLNDTIVVFDRIREDVRQEKGL
SYKQIINLSINQTLSRTTLTSFTTALVLIILYFFGGIAINDFVFVMLLGVIVGTYSSIFV
ASPIVAFWHRKIGSRIKDDAPVPVRSK
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacgaccggttatcttgcgaagtttgatcgccctggtggtaatagccgtattt
tttatatctattcatcctttgacgcagcgtgatttctatgagactttcaaatctctgctg
aagaattctaaaaatccggtagctgccaagctggtccgggaagctaaagagtctcaggct
aaagatccaagcatgtatgcaacaacagcgttgctcaatgccgccaataaaaacggggtt
gaactgaaaactctggtaaatggaaaagacctgcaggtcaacagcgatgtaatcagcctg
gttcgcaaaaaagccagcagttcaattcgccttggtcttgacctgaacggcggtgtcgaa
ttcatgctggagctggtgccggatgaaaacttccttaacagcattaaaaaggaagtaaag
aatgataagaatgcccaggcgcagtatgaaaagcgcctgactactgagttcaaccgctat
cgtgatatcgctattgagaccctgagaagccgtatggaagctcagaagatttacgaagcg
gaaattactccggcgggcggcagatatatttctctcaaagttccggtcgtatccaaggaa
gaaaaacttaagctcctcagacttataaaaatgagcgcgaaactgcgcttccgttttgtc
aatcctgataatgaaaaactggtccagcagtatctggccgggcctaaaaaattcagaagt
cctattggctttgacttgatgaaaatcaaggagttcaggagtggcaagaaagagctgacc
cgatattattttgtaaataagcgttgggctatggatggcaagagcattattgatgcttat
ccgacaaaagatcagttcggacaacgcaaaattatccttaaattcaattccgccggagcc
gaacgctttggcgaaattacctctaaaaataaaggtcgtcaactggcaatcgtgctggac
gacaaactctactgtgcaccggttattcgcgacgctatcactaccggcagcgctgagatt
tcgggcaacttctccaatgaagaagccaagaatatttccgatgctctggtcagcggcagt
ctaccgttccagataagggttgaaggtatttttgacacagacccgactctgggcgtggct
aatgttcagaacggtatctgggcgggtattttcgctttggctattgtgatggcatttatg
attttctactacctccgagcaggtgttgtggcagtaatcgcacttggcgtaaatatcatt
ctggtgctcggcgcactggcggcttttgatgctactttgacgttgccgggtatcgccggt
attatcctgactattggtatgtcagtggacgctaatgtgcttatctttgagcgaatacgt
gaagaacttgaacgcaaaaagagcttgcagacagccattgagctgggatacagtcgagcg
tttattacgattctcgactcaaacctgacaacgctgtttaccgctttgattctgatgcgg
gtcggcaccggtccggtaaaaggtttcgccgttactttgagtatcggtatcctgaccagt
atgttcactgcgttgttcctgaccaggctgatttttgactacattgaccgggttcatccg
tttaaagggatgaagatgctgacatttgtcaggaatccgaaaattgactttgtcggtttg
cgtaagtatgctttcaccctttcgggtgttttgatagttgccagtttgctggtcttcggt
gctaaaggcaagaccatgtttggagttgactttaccggcggtacccagataacctttgat
tatcagaagcgagtaccggtgaacaaagttgaagacaccttgaagaaagccggatatgaa
gcccaggtcagttataagacaagcgcatcacaggttgataataagaaggttgaaattctt
attcgcaagaatatcaagcttgaaaaaaccggaagcggggaagcggtcagtcccaaagag
cagattgccggcatgctcaataaaacctatccggcctccaagttttcagggggacaggaa
acctccatcggtggtctggtcggctatgaatttactaaatcggccctgctggctattggt
ctggcctttctcggtatcataatctacatttcaatacgatttgagtttgcttatgcgata
gcctcaattatcgctttgattcatgatgttattgtggctaccgggatatttgttgcctgc
ggcaatgaggtttctctttcagttgtagccgccatcctgacgattatcggttattcgctg
aatgatacaattgtggtctttgaccgtatccgtgaggatgtcaggcaggaaaaaggcctc
agctacaagcaaatcatcaacctcagtattaaccagactctcagccgtactactttgacg
tcatttacaacggcactggtgcttataatactgtatttcttcggcgggattgcgatcaac
gacttcgtattcgtcatgctgctaggagttatagtcggtacctactcatcaatttttgtt
gccagcccgattgtggctttctggcaccgcaaaattggttcacgcatcaaagacgatgca
ccggtgccggtcaggtctaaataa
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