Lentisphaerota bacterium zth2: JYG24_12165
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Entry
JYG24_12165 CDS
T10935
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
lbv Lentisphaerota bacterium zth2
Pathway
lbv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JYG24_12165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbv03019
]
JYG24_12165
Enzymes [BR:
lbv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JYG24_12165
Messenger RNA biogenesis [BR:
lbv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JYG24_12165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25_NTPase-like
AAA_22
CMS1
NAT10_TcmA_helicase
UvrD-helicase
Flavi_DEAD
MDMPI_N
HI1480
Motif
Other DBs
NCBI-ProteinID:
QSH40998
LinkDB
All DBs
Position
complement(2852057..2853307)
Genome browser
AA seq
416 aa
AA seq
DB search
MTFEKLGLIPDLLSTIGTQGYEKPTPIQAKSIPVILEGRDVLGSAQTGTGKTAAFTLPVL
QILHNSKSGERKPRVLVLTPTRELAAQVEQSVKTYGGKLRTRSVAVFGGVGINPQINRLR
QGVDILVATPGRLLDHVEQKTADLSKIEILILDEADRMLDMGFIHDIRKVLDLLPPKRQN
LLFSATFPKAVKRLSHQILDNPVTIEADRKNSTAEKVRQVVHLIEKGQKRHLLSHLIREE
EWTRTLVFTRTKWGADKLAKQLSRDGIAAAAIHGGKTQSARTRVLADFKSGKITAMIATD
IAARGLDIADLPHVVNYELPNVPEDYVHRIGRTGRAGAEGIAISLVSGDEKPLLTGIEKF
LNWNIKRVRVRNFEKVKQERPPKRNYGRQRSTTKSAQSARKSGRTGRRFNRTKSKV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgaaaaattagggctgatacccgatttattaagtactattggaactcaaggc
tatgaaaagcctacaccgatacaggcaaaatccataccggtaatcctggagggccgtgat
gtgcttggcagcgctcagaccgggactggaaagaccgctgcgtttactttgcccgtcctg
cagatactgcacaactcaaaaagcggagaaagaaaaccgcgagtgctggttctaacccct
acccgggagctggccgctcaggttgaacaaagcgtcaaaacttacggcggcaaacttcgg
acgcgttcggttgctgtctttggcggcgtaggtatcaacccgcagataaaccggctgcgg
cagggagtcgatattctggtcgcaactccgggtcgtctgctggatcacgttgaacagaaa
actgcagatttgtccaaaatagaaattctgattctggacgaggctgaccgtatgctggat
atggggttcatccatgatatccgcaaagtacttgacctgcttccgccaaagcgccagaac
ctgctgttttcggccacgttccctaaagctgtcaaacggttgagccatcagattcttgat
aaccccgtaactattgaagctgatcgcaaaaattctaccgcggagaaggtcagacaggtt
gtacaccttattgagaaagggcaaaaacgtcatctgctgtcacacctgataagagaagaa
gaatggactcgcactttagttttcacccgcaccaagtggggagcggataaactggcaaaa
cagctgtccagagacggcatcgctgctgctgctatccacggcggaaaaacccagtcagcg
cggactcgcgttctggctgacttcaaatccggtaaaattacggccatgatcgccaccgat
atagcggctcgcggcctggatatagctgatctgccacatgttgtaaactatgaactgccc
aatgtccctgaagactacgtacatcgcattggcagaaccggacgcgcaggtgccgaaggc
atagcaatatcactggtttccggcgatgaaaaaccgctgctgactggaattgaaaagttt
ctcaactggaacattaagcgcgtaagagtcagaaactttgaaaaagtgaagcaggagaga
ccgcctaaaagaaattacggcaggcagcgcagcaccactaagtcagcccaatccgccagg
aaatcaggcaggaccggccgtcgcttcaaccgaaccaagtcaaaggtgtaa
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