Lentisphaerota bacterium zth2: JYG24_13005
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Entry
JYG24_13005 CDS
T10935
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lbv Lentisphaerota bacterium zth2
Pathway
lbv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JYG24_13005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbv03019
]
JYG24_13005
03016 Transfer RNA biogenesis [BR:
lbv03016
]
JYG24_13005
Enzymes [BR:
lbv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
JYG24_13005
Messenger RNA biogenesis [BR:
lbv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JYG24_13005
Transfer RNA biogenesis [BR:
lbv03016
]
Prokaryotic type
tRNA degradation factors
JYG24_13005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
S1_2
Motif
Other DBs
NCBI-ProteinID:
QSH41158
UniProt:
A0A975A8T3
LinkDB
All DBs
Position
complement(3050031..3052139)
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AA seq
702 aa
AA seq
DB search
MAEEKVLFNISEEKSMEISTGKLAKLANGSCLVRMGDTVLLVAACSGPARPGSDFFPLQV
DYREKYSAAGKFPGGYIKREGRPSEKEILTCRVTDRPLRPLFPKGFFDEVQIQALLLSAD
GQNESDVMCILGASAALTLSDLPFMGPIGALRVGKIDGKLVANPTHDEMKKSSLELIYAG
SPDKVIMIEGEADELTEAELEEAMRFANEIVKVQVQAQLDLAAKAGKEKKEPVLHLVPEA
IEQALDKYCEGKIEDACLVPGKNDRLTVLDEIFDGAMEELRAQFTDMDADEFKLEMKKGF
DALVKKTTRNAILEKQYRPDGRGIEDIRELTSEVNLLPIVHGSGLFTRGETQALVIATLG
NEKASQEYDIITGPESGNKRFYLHYNFPNFSVGEVGRIMGPGRREIGHGNLAERSVAKVI
PEDFPYVVRCVSEVMSSNGSTSMASVCGATLALMDAGVPIKAPVGGISCGLVTGNGKELL
LTDIIGAEDHFGDMDFKVCGTREGITGFQLDLKLPGISIDLLCEGMKRNYDARMKVIDCI
ESCLAQPREKISPNAPGMAVIKINPDKIGALIGPGGKNIRSITEETSADIDVEEDGTVKI
MAENQEKLEEAKNRVIGCTAEPEIGKIYRGKVVNVRDFGAFVEIMPGCDGLLHISEMANY
RVRQVKDICNEGDFVTVKVIDIDQSGKIRLSRKAALEEIGEE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagaaaaagtattatttaatatttctgaagagaaatcgatggaaatttccact
ggaaagctggctaaactggctaacggctcatgtctcgtaagaatgggcgacacagtactg
cttgtagcagcttgctcaggccctgcacgccccggttcagacttttttccacttcaggtg
gactatagagaaaaatacagcgcggccggcaaatttcccggcggttacatcaaacgagaa
ggtcgcccgagtgaaaaggaaattctcacttgtcgcgtgactgaccgtcctttgcgcccg
ttgtttccaaaaggtttttttgatgaagtacagattcaagcgctgcttttaagcgcagac
ggacagaatgaatcagatgtcatgtgtatcctgggagcttcggcagccctgactctgtct
gatttaccttttatgggacctatcggcgccctgcgtgtcggaaagattgacggcaaactt
gtagccaacccgacacatgatgagatgaagaaaagctcacttgagctcatctatgccggt
tctccggataaagtcataatgattgaaggtgaagctgatgaacttacagaagccgaactg
gaagaagcaatgcgcttcgctaatgaaattgttaaagttcaagtccaggctcagcttgac
cttgcggctaaagccggcaaggaaaagaaagaacctgtcctgcatctggtaccggaagcc
atcgaacaggctctggacaagtactgcgaaggaaaaattgaagatgcctgtctggttccg
ggcaagaatgatcgtttaacagttcttgatgagatttttgacggtgccatggaagaactt
cgtgcacagttcactgacatggatgccgatgaatttaagcttgaaatgaaaaaagggttt
gacgccctggtaaagaaaacaacccgaaatgctattctcgaaaaacagtaccgcccggac
ggtcgcggcattgaagatattcgtgaacttacttcggaagtaaacctgctgccaatcgtt
cacggttcaggtcttttcacccgtggggaaactcaggctctggttatcgctactcttggc
aatgaaaaagccagccaggagtatgacatcattaccggccctgaatctggcaacaaacgt
ttctacctgcattacaacttccccaacttctcagttggcgaggtcggccgcatcatgggc
ccgggtcgtagagaaatcggacacggtaatctcgcagaacgttctgtagcaaaagtaatc
ccggaagacttcccgtacgttgtacgctgtgtttccgaagtaatgtcctcaaacggatcg
acttcaatggcgtccgtgtgcggtgcgaccctggccctgatggatgccggcgtgccgatc
aaagcccctgtaggcggtatttcctgtggacttgttactggcaacggcaaagagctgctg
ctgactgatattatcggcgcagaagaccatttcggtgatatggactttaaggtctgcggt
actcgtgaaggcattaccggcttccagctggacttgaaactgccgggtatcagcattgac
ttgctttgcgaaggcatgaaacgcaattatgatgccagaatgaaagtaattgactgcatt
gaaagttgtctggctcagccgcgggaaaaaatcagtcccaatgctccaggcatggcagtc
attaaaatcaacccggacaaaatcggagccctcatcggccccggcggcaaaaacatccgt
tcaatcactgaagagaccagtgctgatattgatgttgaagaagatggcaccgtcaagatc
atggctgaaaatcaggaaaagcttgaagaagccaagaatcgggttatcggctgcaccgct
gaaccggaaatcggcaaaatctatcgcggcaaagttgttaacgtacgtgattttggtgcg
tttgttgaaatcatgcctggctgtgacggccttctgcatatttctgaaatggctaactat
cgcgtacgccaggttaaggatatatgcaatgaaggtgactttgtcactgtcaaggtcatt
gatattgaccagtccggcaaaatccgcctgagccgcaaagctgctctcgaggaaattggt
gaagaataa
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