Lachnospiraceae bacterium oral taxon 500: C3V36_01540
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Entry
C3V36_01540 CDS
T05749
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
lbw
Lachnospiraceae bacterium oral taxon 500
Pathway
lbw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
C3V36_01540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbw03400
]
C3V36_01540
DNA repair and recombination proteins [BR:
lbw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
C3V36_01540
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GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_14
AAA_27
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AVM70396
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Position
complement(315557..318139)
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AA seq
860 aa
AA seq
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MMQQYFTLKEEYTDCILFFRLGDFYEMFFEDAKTASRELEIALTGRDCGMEEKAPMCGVP
YHAVDNYLYRLVGKGYKVAICEQVEDPAAAKGIVRREVVRIVTPGTNLNPDNLDETKNNY
IFCLIAYGGSYGIAYTDISTGDFRTTQAHSFEQAVEEIAKVAPAELLLQTDMQQDSDFMQ
RVTGRQHIFVTTKEDYFFDLAACRQVIEKHFGVLTLEGIGNLEPAHQIASGALLRYTGDT
QKGNISQISHIEVYQPSQYMLLDPATRRNLELTETMRDKDKRGSLLWVLDKTRTAMGARM
LRFFIEQPLLDQALIEARLSAVEELKNAPFFLAELRELLEPIYDLERLMAKLIAKTANPR
DLLAFKNSLAMLPHIKNLLAEAKCEALAGLRQELDVLEDLWQKIEAGIAEDAPISSKEGG
VIKPGYHQKVDQYRLASTQGKTWLLELEQKEKEATGIKNLKIKYNRVFGYYLEVTNSYAQ
LVPERYIRRQTTANAERYVTEELKKMEETILGAEEKRLALEYELFQEIRDTCAGQSRRIK
QTAARVAALDAYQSLAYVAAQQNYIRPAFNRQGKTEIADGRHPVIEKMLPENEFIVNSAS
LSRTEHLLIITGPNMAGKSTYMRQIALIQLMAQIGSFVPAASATLGIVDRIFTRVGASDD
LSSGKSTFMVEMAETANILRNATPDSLVILDEIGRGTSTYDGLSIAWAVVEYLASRQLSG
AKTLFATHYHELTELEGKIDGVVNYCISVAERGEDIIFLRKIIRGGADKSYGIQVARLAG
VPYVVVQRAREILAELSAADIAAQREIKPQNLAFRAPAGMQLDLFGDEDYLAEIKALELD
DMMPKAAWEFLSRLQQRLKK
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcaatatttcacgctgaaagaggaatataccgactgcattttattttttcgc
ttaggcgatttttatgaaatgttttttgaggacgctaagaccgccagccgggagctggaa
attgcactgaccggcagggactgcggcatggaggaaaaagcgccgatgtgcggcgtgccc
tatcacgcagtggataattatttgtaccgcttggtcgggaagggctacaaggtggcgatc
tgcgagcaggtcgaagatccggcagcggccaagggcattgtccggcgcgaggtcgtgcgg
attgttacgccggggacgaacctaaatccggacaacttggatgaaaccaaaaacaattat
attttttgcctgattgcctatggcggcagctatggtattgcttataccgatatttctacc
ggcgattttcggacgacacaggcacacagctttgagcaggcagtggaagaaatcgccaag
gtggcaccggctgagcttttgctccagacggacatgcagcaggattcggattttatgcag
agagtaaccggccggcagcatatctttgtaacgaccaaagaagattatttttttgatttg
gcggcttgccggcaggtgattgaaaagcatttcggcgttttgacgctggagggcatcggc
aatttggaaccggctcatcaaatcgcttcgggagcgctgctgcgttataccggcgatacc
caaaaggggaatatcagccaaatcagccatattgaggtttatcaacccagtcaatatatg
ctgcttgacccggccacccggcgcaatctcgaactgacggaaaccatgcgcgataaagat
aagcgcggctcgctcctatgggtgctggataagacgaggaccgcgatgggcgctcggatg
cttcgttttttcattgagcagccgctgctggaccaagcattgattgaggcgcggctgtca
gcggttgaggaattgaaaaatgcgcccttttttttggcggaactgcgggaactcttagag
ccgatttatgatttggagcggctgatggccaagctgattgccaaaactgcgaatcccaga
gatttacttgcctttaaaaattcactggcaatgctgccgcatattaagaacctgctggct
gaggccaaatgcgaggccttggccggcctccggcaggaactggatgttttggaggattta
tggcaaaaaatcgaggccgggattgcggaggatgcgccgatttcctccaaggagggcggc
gtaattaagccaggttaccatcaaaaggtggatcagtaccgtttagcctcgacacagggc
aagacttggctgctggagttggagcaaaaggaaaaggaagcaaccgggattaaaaacctg
aaaattaagtataaccgagtgttcggctattatctggaggtcaccaattcctatgcgcag
ctggtgccggagcgttatatccggcggcagacgacggccaacgccgagcgctatgttacc
gaagaactcaagaaaatggaagaaacgattttgggggcggaggaaaagcgactggccctt
gagtatgagttgtttcaggagattcgtgatacctgcgctggtcagagccggcggattaag
cagacggcggcacgggttgcggcgttggacgcttaccagtccttggcctatgtggcggcg
cagcaaaattatattcggccggcatttaaccggcaaggcaaaacggagattgccgacggg
cggcatccggtgattgagaaaatgctgccggaaaatgagtttatcgttaattcagccagc
ttaagccggacggaacatttactgattattaccgggccgaatatggcgggcaaatcgaca
tatatgcgccagatcgcgctgattcagctaatggcgcaaatcggcagctttgttccggcg
gcaagtgcgacgctgggcattgtagaccggatatttaccagagtgggtgcctcggacgat
ctatcctcgggcaaatcaacttttatggtggaaatggcggaaaccgctaatattttgcgg
aatgctacgccggacagtttggtaattttagatgaaatcgggcggggaacttcgacttat
gatggcctcagcattgcctgggcagtggttgaatatttggccagccgtcagctttccggt
gccaagacgctttttgccacgcattaccatgagctgacggagctggagggcaagattgac
ggcgtggttaattactgcatttcggtagcggagcgaggcgaagatattatttttctgcgt
aaaatcattcggggcggcgctgataaaagctatgggattcaggtggcgcgcttagccgga
gttccttatgtggtggtgcagcgggccagagaaatattggcggagttatcggcagccgat
attgccgctcagcgggagattaagccgcaaaacttggcttttagagcgccggccggtatg
cagctggatttgttcggcgatgaggattatttggcggaaatcaaggccttggagctggat
gatatgatgcccaaagcggcgtgggagtttttaagccggctgcagcagcggctgaaaaaa
tag
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