Lachnospiraceae bacterium oral taxon 500: C3V36_02285
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Entry
C3V36_02285 CDS
T05749
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
lbw
Lachnospiraceae bacterium oral taxon 500
Pathway
lbw03030
DNA replication
lbw03430
Mismatch repair
lbw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C3V36_02285
03430 Mismatch repair
C3V36_02285
03440 Homologous recombination
C3V36_02285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbw03032
]
C3V36_02285
03400 DNA repair and recombination proteins [BR:
lbw03400
]
C3V36_02285
Enzymes [BR:
lbw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C3V36_02285
DNA replication proteins [BR:
lbw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C3V36_02285
DNA repair and recombination proteins [BR:
lbw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C3V36_02285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
HHH_6
RNase_H_2
DNA_pol3_a_NI
Rv2179c-like
tRNA_anti-codon
DEDDh_C
DUF655
HHH_3
Auto_anti-p27
Zn_Ribbon_1
Motif
Other DBs
NCBI-ProteinID:
AVM68181
UniProt:
A0A2R3MXE9
LinkDB
All DBs
Position
complement(477263..481564)
Genome browser
AA seq
1433 aa
AA seq
DB search
MTKKLTETFVQFTFPADLREIFAEAEVSRIVFDRQKLRLDIYLELSRVIRPSYIEQLAKS
LTAHLGYSVRLWETYRLDGDLSRIYPQWADSLFYYLEKGDPFLANTLRLSQAKISGDQIQ
YQVPAVGYEYIMPLEPGKKIERLFAEKLQREVVISFYKKDEKNQILQEFIQNRDMESRML
ATVPVGQEMAAPVKKVMEKPEGILYGKKEIKGEITPVADLEESRSFYNIDVEIVGEIDVR
ELRSGKRMVKMFLTDYQKTVSGKLFADDKETTEELVKGLKEAKALRVSGKYSFDSFDMQP
AFMIQTIQPLSGSIKQERVDEAEEKRIELHCHTQMSDMDGIIPVKTAVKQAAKWGHPALA
ITDTAVVQAFPDAFSAGKAFAGSLKLIYGMTAFMVDDERPVLWFGRGQSLRDTYVVFDIE
TTGLITSCDSLTEIGAVKIKDGKIIERFSEFINPGRPIPRRIQELTHITDDIVRDAPRIE
EVLPRFMDFSAGAVLVAHNSDFDISFIKKECQKLDLPVDFTYMDTLELARHLFPEFKRYG
LDYLSKELEVSLSQHHRAVYDAEATAGVLLKMFQRLEEIGVHDLNDVLTWAQQNPINWEK
QRPTQIMILTKTRAGLLNLYKMVSESHINTFAGVPRLKKSYLHRMREGLLYGATGGDNDF
YQAFIEGRCQELIDRTAEFYDYFELYPIPVARTYVGTDMIAEDQALGALQVELYRFVKSL
GKKVIASANVKILNPEDEILRRILLVGKKTVRNADVPDYCYFRTTGEMLRDFAYFGQAEA
REMVITAPREIVDSLDEIEPVERDKYPPEIPNSDEELKSLCYGRAHQIYGDPLPEIVSER
LERELHSIISNGFAVMYMIAQKLVKKSNEDGYLVGSRGSVGSSFVATMSGITEVNPLSAH
YVCPNCQYSDFAPPELKDDPEMSGADLPDRSCPKCGAPLSKDGHDIPFETFLGFYGDKEP
DIDLNFSGEYQSRAHEYTEEIFGKGHVFRAGTIGTLADKTAYGFVKNYFEERQIAMSEGD
INRYVQGCVGVRRTTGQHPGGIVVVPRDQEIYKFTPIQRPANDRESNIITTHFDYHSIDH
NLLKLDILGHDDPTMIRFLEDLTGVNAQKIPLDDPKVMSLFQSTEALGIQPADIGGVEMG
SLGIPEFGTDFVIQMLKDTKPKAFSDLIRISGLSHGTDVWINNGQEMIRNGLATITTVIS
TRDGIMSYLINKGMEKGLAFTIMESVRKGKGLKDEWVTAMTASDVPEWYIESCRRIKYMF
PKAHAAAYVMMAFRIAYFKVYYPLEYYAAYFSVRASTFDYVVMGKGREVLEEAAQDLKNR
ADKLTKKEQDMEKEMQTVREMYARGFGFHRIDLYQAEATRFKIIDGKIMPSFCSINGMGE
KAALSIVEARKDAPFLSIEDLISRTKLSKTLVEILRVNGILEGLSETNQISLF
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgactaagaaattgacggaaacatttgtgcaatttacttttccggctgatttgcgagag
atttttgcggaagcagaggtttctcgcattgtttttgaccggcagaaattgagactggat
atttatttggagttaagccgggtgattcgcccctcatacattgagcagctggcgaaaagc
ctgaccgcgcacttgggctattcggttcggctgtgggaaacataccggctggacggggat
ttgagccggatttatccgcagtgggcggacagcttattttattatctggaaaaaggcgac
ccgtttttggccaatacgctgcgtttgtcgcaggccaaaatcagcggggaccaaatccag
tatcaagtaccggcggtcgggtatgaatatattatgcccttggaaccgggaaaaaaaatt
gagcgcctgtttgccgagaaactgcaaagagaagtggtgatttccttttataaaaaggat
gaaaaaaatcaaatcctgcaggagtttattcaaaaccgcgatatggagagccggatgctg
gcaacggttccggtcggtcaggagatggctgcgccggtgaaaaaagtgatggaaaaaccg
gaaggcattctttacggcaagaaggaaattaaaggcgagattacgccggtggcggatttg
gaggaaagccgatcattttataatattgatgtcgaaatcgtcggcgagattgatgtgcgc
gagctccgctccggcaagcgaatggttaagatgttcctgaccgattatcaaaaaaccgtc
agcggcaagctctttgcggatgataaagaaacgaccgaggagttggttaagggattgaaa
gaagccaaagccctcagagtcagcggcaaatacagctttgacagctttgatatgcagccg
gcatttatgattcaaaccattcagccgctgagcggcagcattaagcaggagcgggtggac
gaagctgaagaaaaacggattgaactgcactgccatacgcaaatgagtgatatggatggc
attattccggtcaagacggcggttaagcaggccgccaaatggggacatccggcgctggca
attaccgatactgccgtggttcaggcttttcccgatgctttttccgctggtaaggccttt
gccggcagcttaaaattgatttatggcatgaccgcctttatggtggacgatgagcggccg
gtgctctggttcgggcggggacaaagcctgcgcgatacctatgtggtctttgatattgaa
accacgggtttgattaccagctgtgacagcctgaccgaaatcggtgcggttaaaatcaaa
gacggtaagattattgagcgcttcagtgagtttatcaatcccggccggccgattccccga
aggattcaggagctgacccatatcaccgatgatattgttcgggacgcaccgcgaattgag
gaggtgttgccgcgctttatggacttttctgctggagcggtgctggtggcgcataactcg
gattttgatatcagctttataaaaaaagagtgccagaaactggatttgccggttgatttt
acctatatggatactttagagctggcgcgccacttatttcctgagtttaagcggtatgga
ctggattatttaagtaaggaattggaagtatcgctcagtcagcaccaccgggcggtttat
gatgcggaagcaacggctggcgtgctgctgaagatgtttcagcgcctggaagaaatcggc
gttcatgatttgaacgatgtattaacttgggcgcagcaaaatccaatcaactgggaaaag
caaagaccgacccagattatgattttaaccaaaaccagagccggcctcctaaacctttat
aaaatggtgtcggagtcgcatatcaatacctttgccggcgtgcctcggctgaaaaagtcg
tatctgcaccggatgcgggagggacttttatacggcgcgaccgggggcgataatgatttt
tatcaggcctttatcgaggggcgctgtcaggaattaatcgaccggacggcggagttttat
gattattttgaactctatccgattccggtagccagaacctatgtcgggacggatatgatt
gccgaagatcaggcactgggcgctttgcaggtagagctgtaccgctttgtgaaaagcctt
ggcaagaaagtaattgccagcgccaatgtcaagattttaaatccggaggacgagattttg
cgccggattttgctggtcggcaaaaaaacggtgcgcaacgccgatgtgccggattattgc
tattttcggacgaccggtgaaatgcttcgtgactttgcctatttcggacaggccgaagcc
agagaaatggtaattaccgcaccgcgcgagattgttgattcgctggatgagattgagccg
gtggagcgggataaatatccgccggagattcccaattccgatgaggaattgaaaagcctg
tgctatggccgggcacatcagatttacggcgatcctctgccggagattgtgtccgagcgg
ctggaaagagagctccattccattatcagcaatggttttgccgttatgtatatgattgcc
caaaagttagttaaaaagtccaatgaggacggctatttggtcggctcacggggctcggtc
ggttcgtcctttgtggccaccatgtccgggattaccgaggttaatccgctgtcggctcac
tatgtttgcccgaattgtcaatattctgattttgcgccgccggagttaaaagatgacccg
gaaatgtcgggtgccgacttgccggacagaagctgccctaagtgtggtgcaccgctgagt
aaagacgggcatgatattccgtttgaaactttccttgggttttacggtgataaagagccg
gatatcgacctgaacttttcgggcgaatatcaaagccgggcgcatgaatacaccgaggaa
atcttcggcaagggtcatgttttccgggcgggaacgatcggtacgctggccgacaagacg
gcttacggctttgtgaaaaattattttgaggaaagacaaattgcgatgtccgagggcgat
atcaatcgctatgtgcagggctgcgtcggcgtgcgccggacgacaggtcagcaccccggc
ggcattgtggtcgtacccagagatcaggaaatttataagtttacaccgattcagcggccg
gccaatgaccgggagagcaatatcatcaccactcactttgattatcacagtattgaccac
aatttgctcaaacttgatattttagggcatgatgacccgaccatgattcgtttcctggag
gatttgaccggagtcaatgcccagaaaattccgctcgatgacccgaaagtaatgtcgctg
tttcagtcaaccgaagcgctcgggattcagccggccgatatcggcggcgtggaaatgggc
tcgctcggaattcccgagttcggtacggactttgttatccaaatgttgaaagacacgaag
ccaaaggctttttccgatttaattcgtatttccggcttgtcgcatggcaccgatgtttgg
attaataacggtcaggaaatgattcgcaatggtttagcgacaattactaccgtcatttcc
acccgcgacggtatcatgtcgtatttgatcaacaaaggcatggaaaaggggctggccttt
actatcatggaatctgtccgtaagggcaagggtttaaaggacgaatgggttacagcgatg
acagcttcggacgtgccggaatggtacattgagtcctgccgccggattaagtatatgttc
cctaaggcgcatgcggcggcctatgtgatgatggcctttcggattgcgtattttaaggtt
tattatcccttggagtattatgcggcgtatttcagcgtcagagccagtacttttgattat
gtggtcatgggcaaggggcgggaggtgctggaggaagcggcgcaggatttgaaaaaccgg
gcggataagctgaccaaaaaagagcaggacatggaaaaggaaatgcagactgttcgcgag
atgtacgcccgcggcttcggttttcaccggattgacctgtatcaggcggaggcaactcgg
tttaagattattgacggcaagataatgcccagcttttgcagcattaacggcatgggcgaa
aaagcggcgctgtcaattgttgaagcccgcaaggacgcgccgtttttgtcgattgaggat
ttaatcagtcggacgaagctgtccaagacgctggtggaaatcctaagagtcaacggcata
ctggaaggcttgtcggaaaccaaccaaattagcttattttag
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integrated database retrieval system
