Lachnospiraceae bacterium oral taxon 500: C3V36_04960
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Entry
C3V36_04960 CDS
T05749
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lbw
Lachnospiraceae bacterium oral taxon 500
Brite
KEGG Orthology (KO) [BR:
lbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbw03032
]
C3V36_04960
03400 DNA repair and recombination proteins [BR:
lbw03400
]
C3V36_04960
Enzymes [BR:
lbw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
C3V36_04960
DNA replication proteins [BR:
lbw03032
]
Prokaryotic type
DNA Topoisomerases
C3V36_04960
DNA repair and recombination proteins [BR:
lbw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C3V36_04960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AVM68653
LinkDB
All DBs
Position
1067549..1070119
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AA seq
856 aa
AA seq
DB search
MDEKNLDRIIPIDLQGEMKKSYIDYAMSVIAARALPDVRDGLKPVQRRILYSMAELGVTP
DKPYRKSARIVGDTMGKYHPHGDSSIYDAMARMAQDFSIRYMLVDGHGNFGSVDGDSPAA
MRYTEARLSKISMEMLADINKDTVDFGPNFDESLQQPLVLPARFPNLLVNGVNGIAVGMA
TNIPPHNIGEVIDAVVKIIDNKVIDQDTEIDDLLKIVKGPDFPTYGRILGKSGIKRAYRT
GRGKILVRAKADIETYAGNKQRILVTELPYQVNKARLIMKIAELVKEKKIEGIADLRDES
GRSGMRIVIELKRDANANIVLNKLYKHTSMQETFGFNMLALVDNEPKILNLKEMLTHYLA
HQEDVVTRRTKYDLKKAEERAHILEGLLKALDVIEEVIALIRASKNVAEAKTGLMEKFAF
TEVQAQAIVDMRLRALTGLEREKLVKELEELHALITRLKAILADEKLLLGVIREELTVIR
EKYQDPRRTVITYDEGEINLEDLIKDELAAITMTHLGYIKRMPISVYKNQHRGGKGMKGV
STREEDFVEDIFIAATHSYLFFFTNKGKVYRLKTYEVPESSRTARGTALVNLLQLGPDEK
ITAVVPIREYKEDNYLVMATKKGMLKKTSLDEYANIRSNGLQAINLREDDDLIEVKLTNG
QAEIFLGTKMGQCIRFSESHIRSVGRNSIGVRGMSLNPEDEVIGMQLLSQGKYILTVSEK
GLGKRTDMAEFTLQNRGGKGLKFYKITEKTGCVIGMKAVDEDNELILITNEGIVIRINVS
DISELSRITSGVKLMDLDAGIFIAGIARLKALEEISEEIEESEDEMLESDEDFDDISEAD
DDWEEDLEDADEDLEE
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaaagaatcttgacaggattatacccattgacctgcagggggaaatgaaaaag
tcatatattgattatgccatgagcgtcattgccgctcgggcgctgcccgatgtcagggac
ggtttaaaaccggtacagcgccgaatcctttattccatggccgagcttggagttacgcct
gataagccttaccgtaaatccgcccgtatcgtcggtgataccatgggtaaatatcatccg
cacggcgacagctcgatttatgatgcgatggccagaatggcgcaggatttttccattcgc
tatatgctggtggacggccacggtaactttggcagtgttgacggcgacagtccggcggcc
atgcgttataccgaagcccgtttatcgaagatcagtatggagatgctggccgatatcaat
aaagataccgttgatttcgggccgaactttgacgagtccttacagcagccgctggtgctg
ccggcccgttttcccaatcttttggtcaacggcgtaaacggcattgccgtcggtatggcg
accaatatcccgccgcacaatatcggcgaggtgattgatgcggtggtaaaaatcattgat
aataaagtaattgatcaggatacggagattgacgatttgttaaaaatcgtcaaaggcccg
gattttccgacctatggccggattttgggcaaatccggaattaaaagggcatatcgcacc
ggccggggaaaaatcttggttcgggccaaagctgatattgaaacctatgccggcaataag
cagcggattttggtgaccgagctcccctatcaggtcaataaggccagattgattatgaaa
atcgcagagctggtcaaggaaaaaaagattgagggtattgctgatttgcgcgatgaatcc
ggccgcagcggtatgcggattgtgattgaattaaagcgcgacgccaacgccaatattgtt
ttaaataagctgtataagcatacctcaatgcaggaaacctttggttttaatatgctggcg
ctggtggacaatgagccgaaaattttaaacttaaaggaaatgctgacgcattatttggcg
catcaggaggatgtcgttacccggcggaccaagtatgacctgaaaaaggcggaggaaaga
gctcatattttagagggcttattaaaagcgctggacgtaattgaagaagtcatcgccctg
attcgggcctcgaaaaacgtagccgaggccaaaaccggcttaatggaaaagtttgccttt
accgaagtgcaggcgcaggcgattgtggatatgcggctgcgggctttgacgggtctggaa
agagaaaagctggtcaaagaactggaagaactgcatgctttaattaccagattaaaggca
attttggctgatgaaaagctgctcttgggcgtaatccgggaagaactgacggtcattcgg
gaaaaatatcaggatccccgccggacagtcattacctatgacgagggcgaaatcaatctt
gaggacttgattaaggatgaactggctgcgattacgatgacccatttgggttatattaaa
cggatgccgatttcggtttataaaaatcagcatcgcggcggcaaggggatgaagggcgta
tcgacccgcgaagaagattttgtggaggatatctttatcgccgcaacccacagctatctc
tttttctttaccaataagggcaaggtttatcgcctgaagacctatgaggttccggaaagc
agccggacggcacggggaacggctttggttaatcttttgcagttggggccggatgagaag
attacggcggttgtgccgattcgcgaatacaaagaagataattatctggtgatggccacc
aaaaagggaatgctcaagaaaacttcactggatgaatatgccaatatccgcagcaatggc
ctgcaagccatcaatttgcgggaggacgatgatttgatcgaggtcaagctgaccaacggt
caggctgagattttccttggcaccaaaatggggcagtgtattcgctttagcgaaagtcat
attcgcagcgttggccggaactcgatcggcgtgcgcggtatgagcctgaatccggaagat
gaagtgatcggtatgcagctcctgtcgcagggcaaatacattttaaccgtatcggagaaa
ggcttgggcaaacggacagatatggccgagtttaccctgcaaaaccggggcggcaagggt
ctgaagttttataagattaccgaaaaaaccggctgcgtgatcggcatgaaggcggttgac
gaagacaatgagctgattttgattacaaatgaaggcattgtcattcggattaatgtatcg
gatatttctgagctgagccggattacttccggggtcaaactgatggatttggacgcgggg
attttcattgccggcatcgccagattaaaggctttggaggaaatcagcgaagaaatcgag
gaaagcgaagacgaaatgttggaatcggacgaggattttgacgatatttccgaggccgat
gatgactgggaagaagacttagaggacgcagacgaggatctggaagaataa
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