Lachnospiraceae bacterium oral taxon 500: C3V36_06065
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Entry
C3V36_06065 CDS
T05749
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
lbw
Lachnospiraceae bacterium oral taxon 500
Brite
KEGG Orthology (KO) [BR:
lbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbw03032
]
C3V36_06065
03036 Chromosome and associated proteins [BR:
lbw03036
]
C3V36_06065
03400 DNA repair and recombination proteins [BR:
lbw03400
]
C3V36_06065
DNA replication proteins [BR:
lbw03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
C3V36_06065
Chromosome and associated proteins [BR:
lbw03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
C3V36_06065
DNA repair and recombination proteins [BR:
lbw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
C3V36_06065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
HU-CCDC81_euk_1
DUF2267
Motif
Other DBs
NCBI-ProteinID:
AVM68840
UniProt:
A0A2R3MYZ2
LinkDB
All DBs
Position
1324695..1324997
Genome browser
AA seq
100 aa
AA seq
DB search
MNKAELVSAIAEKAELSKKDAEKGLKAFMDVVTEELTKGGKVQLVGFGNFEVAERKERKG
HNPQTKQQITIPASKAPKFKAGKALKDAVNVPAPKSKKKK
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcggaattagttagcgcaattgcagagaaggcggaactgagcaagaaagac
gcggaaaaaggcttaaaggcttttatggatgttgttaccgaagagttgaccaagggtgga
aaagtacagttagttggctttggtaattttgaagtagccgaaagaaaagaaagaaaagga
cacaatccgcagaccaaacagcagattacgattccggcttcgaaggcaccgaagttcaaa
gctggtaaggctttaaaggatgcggttaatgtaccggctccgaaatccaagaagaagaaa
taa
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