Lachnospiraceae bacterium oral taxon 500: C3V36_06325
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Entry
C3V36_06325 CDS
T05749
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
lbw
Lachnospiraceae bacterium oral taxon 500
Brite
KEGG Orthology (KO) [BR:
lbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbw03009
]
C3V36_06325 (rimO)
Enzymes [BR:
lbw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
C3V36_06325 (rimO)
Ribosome biogenesis [BR:
lbw03009
]
Prokaryotic type
ribosomal protein modification factors
C3V36_06325 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
AVM70463
UniProt:
A0A2R3N3L4
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All DBs
Position
1389695..1391023
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AA seq
442 aa
AA seq
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MYVESLGCDKNLVDTEVMLGRLSKKGCRIVLSPEEADIAIINTCSFIHDAKKESVDSILA
LAEEKKAGRLPKIIVTGCLSELYREQIRREIPEVDGVLGATNTDRIEELVESIMAGQSRE
IFDSPDYDAAVFLERISESGKYYGFLKIAEGCDNHCTYCIIPKLRGKFRSREMDSLVEET
KYLAAQGKRELILVAQDVGKYGVDLYGRRALPELLEKLAAVEGIDWIRLLYVYPEDVTDE
LIAAIKKGYALPYLDMPLQHADDEILRKMARKSTAAQLRALVAKLRREIPDICLRTTFIT
GFPGESEENFANLLAFLQEMKFDRVGVFPYSKEENTPAARMKEQVPARLKKKRQKELMLA
QQVITFAKNEELIGREFRVMIDAYLPQDGVYIGRTYRDAPEVDGYVFVESRRELLSGDMV
RVRITAVNEYDLIGEEIDELSE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atatatgtagaatcactgggctgtgataagaacttggttgatactgaggtgatgctgggg
cggctgagcaaaaagggctgccggattgtgctttcgcccgaggaagcggatattgcaatc
attaatacctgcagttttattcacgacgcaaaaaaggaaagtgtcgactcgatcttggcg
ttggcggaagaaaaaaaggccggccgcctgcctaaaattattgtcaccggttgtttatcg
gaactttaccgggagcaaatccgccgggagattccagaggtggacggggtattgggtgcg
accaataccgaccggattgaggaactggttgagagcattatggccgggcagagccgggaa
atttttgacagtcccgactatgacgctgcggtttttttggaaagaatttcggaaagcggc
aaatactatggctttttaaagattgccgagggctgcgacaatcactgcacctattgcatt
attcccaaattaagagggaagtttcgcagccgggaaatggacagtttggtggaggaaacc
aagtatttagcagcgcagggcaagcgggagctgattttggtggcgcaggacgtgggcaaa
tacggcgtggatttgtatggccggcgggcgctgcccgaactgctggaaaagctggcggcg
gtggagggcattgactggattcggctgctctatgtttacccggaagacgtaacggacgag
ctgattgccgctataaaaaagggctatgccctgccgtatttggatatgcctttgcagcat
gccgacgatgagattttaaggaaaatggcgcgtaagtcaacagcggctcagctgcgggca
ctcgttgccaaactgcgccgggaaattccggatatttgtctgcgaactacttttattacc
ggttttccgggagaaagcgaagaaaactttgctaatttactggcgtttttgcaggaaatg
aagtttgaccgggtaggggtcttcccttattccaaggaagagaatacgccggcggctcgg
atgaaggagcaggtaccggcccggctcaagaaaaagcggcaaaaggaactgatgctggct
caacaggtgattacctttgccaaaaacgaggagctaattggccgtgagtttcgggtgatg
attgacgcatatttgccgcaggatggggtttatatcggccgcacttaccgggatgcgccg
gaggtggatggttatgtgtttgtcgaaagcagacgggagcttttatccggcgatatggtc
agggtcaggattaccgcggtcaatgagtatgacttgataggagaagaaatagatgaactt
agcgaataa
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