Lachnospiraceae bacterium oral taxon 500: C3V36_06400
Help
Entry
C3V36_06400 CDS
T05749
Name
(GenBank) hypothetical protein
KO
K19505
sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator
Organism
lbw
Lachnospiraceae bacterium oral taxon 500
Brite
KEGG Orthology (KO) [BR:
lbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lbw03000
]
C3V36_06400
Transcription factors [BR:
lbw03000
]
Prokaryotic type
Helix-turn-helix
Other families
C3V36_06400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PRD
Sigma54_activ_2
AAA_5
Mg_chelatase
AAA_14
MarR_2
NACHT
AAA_22
AAA
KAP_NTPase
AAA_16
MCM
nSTAND3
BrxC_BrxD
RNA_helicase
ATPase_2
AAA_2
HTH_64
Torsin
ATPase
HTH_24
HTH_IclR
AAA_24
EAP30
HTH_5
AAA_18
Cor1
Motif
Other DBs
NCBI-ProteinID:
AVM68897
UniProt:
A0A2R3MZD9
LinkDB
All DBs
Position
complement(1405228..1407909)
Genome browser
AA seq
893 aa
AA seq
DB search
MAKTIRQQIFEYIQEKSKNLKEPALQHCTANQISRQFLISRSLASQYLNDMAREGYLIKL
KTRPVAFLSRYQLEKDSGKPIKQDGFLSYEELIRFLHGKQQNFMKAIGHEYALKDCIEKI
KTAIQYPHGGLPILIYGNHGSGKTFMAERIRDYFFDHGLLQREEQYIYINCNKLDDVRLK
YTLFGYLDTKAQVCPGALEKAKDGMIVIDDIASMSAETQENLLQYLETGTYHYANSNAAL
LSSEARIILIADEVPGKVFSQHFLSHFPFMIELPSLKDRTIREKMALILSFFKRQALISS
CEILLSNKVMDYLINQCSRYEILSLKQHILLIFAKAYQTGEKQICVGMRYISDDAYPMDT
SDDEAYYNLEYYIPKKLEAYRDFSRDFPELLKQYQAEELSTTQFYEKLFQALAKFNDAVI
FHKDYLALPLKRYEKYIESVCKLTENNANIHISEFIRGLLAKYLHMQSYNPEADEQTDSC
DQILLFFQEHHPEEYAFTQEFTDILERNFGISLNLIHQTAFLLNQLLYSNDMTKKQTLAL
IMCHGNATATSIANVVNTLLSSHVFDAFDMPMTSDAAGMLLQVKNYLRPKKFFENLVLIV
DMGSLTGIAKELTAFEDANIILISNASTPLALHVGSMILRKCAPEEIRDHLDNVKIECQL
IPKSGKEKAILFSSENGINVADKMRLLFEASIPVKTELKLISVDFPHLAGAERKNLLNKY
DILFVEGIVDPEIPGVEFINLGEIVSFQAMDRIHQFLGEFLNAEEMDIFRRNLLKNFSLE
NLMESLTILNPSPLLNLVEETIHRLMQSIGYQIPEKTLISLYVHVCCFIERMVTRTPIRT
YHDLERFQQEKKEFIHAFIRSFEKITTHYHVEIPMSEIAYIYDYIEMSKSDPN
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagacaattcgccagcagattttcgagtacattcaggaaaaatcaaaaaatcta
aaagagccggcgctgcagcattgtaccgccaatcagatcagccggcaatttctgatttcc
agaagtctggcctcccaatatctgaatgatatggcgcgcgaaggttatctgatcaagctc
aaaaccagaccggtggcttttctctccagatatcaattagaaaaagacagcggtaaaccg
atcaaacaggatggttttctgtcttatgaagaactcattcgcttcctgcacgggaaacag
caaaatttcatgaaagcgatcggtcatgagtatgcgctgaaagattgcattgaaaaaata
aaaacggcaattcaatatccccacggcggtttgccgatcttaatctatgggaaccatggc
agcggaaaaacatttatggccgaacggattcgcgactatttctttgatcatggtcttctg
caacgggaagaacaatatatctacataaattgcaataagcttgatgatgtccgattaaaa
tacacgcttttcggatatcttgataccaaggcccaagtatgtccgggcgcgctggaaaag
gccaaagacgggatgatcgttatcgatgatattgcttcgatgagcgcggaaacacaggaa
aatctcctgcaatatctggaaacaggaacctaccattacgcgaactccaatgccgccctc
ctttccagtgaagcccgtattattttaatcgccgatgaagtgccgggaaaagtattcagc
caacattttctcagtcactttccgtttatgatcgaactgccctccctgaaagaccggaca
atacgggaaaaaatggcattgatcctgtcgttttttaagcgacaggcactgatctcctcc
tgtgagatcttgttaagcaacaaggtaatggattacctgattaatcaatgcagccgatat
gaaatcctgtccttaaaacagcatattcttcttattttcgccaaagcctatcagaccggg
gaaaagcagatttgtgtcggcatgcgctatatctccgatgacgcgtatccgatggatacc
tccgatgatgaagcttattataacctagaatattacatccctaaaaagctggaagcgtac
cgggatttcagccgggatttccccgagctgctcaagcaatatcaagcggaagaactgagc
acaacccagttctatgaaaaactgtttcaggcactggccaagtttaacgacgccgttatt
ttccataaagattatttggcgctgccgttaaaaagatatgagaaatacattgaaagcgtc
tgcaaattaacagaaaataacgccaatatccatatatcggaatttatccgcggtttgttg
gcaaaatatctgcacatgcagtcctataatccggaagccgacgagcagaccgacagctgt
gatcaaattctgctgttttttcaggagcatcacccggaagaatacgcgttcacccaagaa
tttactgatattttggaacgaaacttcggcatttcccttaaccttatccatcaaacagct
tttttgctaaaccagctgctatatagcaatgacatgacaaagaaacaaacgctggccttg
atcatgtgccacggcaacgccacggcgacttctattgccaatgtagtcaatactctccta
tcttctcatgtgtttgacgccttcgatatgccgatgaccagtgacgcggcgggaatgcta
ttacaagtaaaaaactacctgcgtcccaaaaagttttttgaaaatcttgtcctgattgtc
gatatgggttcactcacgggaatcgcgaaagaactgactgcttttgaggatgcaaacatt
atcctgatcagtaatgcttctacgcccctggctcttcacgttggcagcatgatcctgcgg
aaatgcgcaccagaagagatccgggatcatctggataatgtaaaaatcgaatgtcagctt
attcccaagagcggaaaagaaaaagcgattttattcagcagtgaaaacggcataaatgtg
gcggataaaatgaggctcttatttgaagccagtattccggtcaaaacggagttaaaatta
atttcggtcgactttccgcatttagccggcgcggaaagaaaaaatctgctgaataaatac
gatattctttttgtcgagggcatcgtcgatccggaaatccccggagtggagtttatcaat
ctgggagaaattgtcagttttcaggcaatggacaggattcatcagtttctcggtgaattt
ttaaacgccgaggaaatggacatattccgccgaaatcttttgaaaaacttttctttggaa
aacttgatggagtcgctcaccatcctaaatcccagcccgctgttaaatctggtcgaagaa
accatacaccgcctgatgcagtcgatcggttatcaaataccggaaaaaaccctgatcagt
ctgtatgttcatgtatgctgctttattgaacgtatggtaaccagaacaccgatcagaacc
tatcatgatttggagcggttccagcaggaaaaaaaagagttcatccatgccttcatccgg
tcctttgaaaaaatcaccactcactaccatgtggagatcccgatgagcgagatcgcttat
atttatgattatatcgaaatgagcaaatctgatccgaactga
DBGET
integrated database retrieval system
