Lachnospiraceae bacterium oral taxon 500: C3V36_08895
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Entry
C3V36_08895 CDS
T05749
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lbw
Lachnospiraceae bacterium oral taxon 500
Pathway
lbw03420
Nucleotide excision repair
lbw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C3V36_08895 (pcrA)
03430 Mismatch repair
C3V36_08895 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbw03400
]
C3V36_08895 (pcrA)
Enzymes [BR:
lbw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C3V36_08895 (pcrA)
DNA repair and recombination proteins [BR:
lbw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C3V36_08895 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
C3V36_08895 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
AVM69348
UniProt:
A0A2R3N0S0
LinkDB
All DBs
Position
1947929..1950151
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AA seq
740 aa
AA seq
DB search
MNRDAELNKEQREAVQSTEGPLLLLAGAGSGKTKVLTHRIAYLIEEKGVRPWHIMAITFT
NKAAKEMRERIDRLIGDAAAEIWVSTFHSSCVRILRRHADAVGFDRSFSIYDAEDSKKLI
KQVLKEMNIDTKALSESYVANLISSAKNRKLTPPELAREVRGDFRREMAVRVYENYQQQL
HQNNAMDFDDLLMMTVQLFESNPDILAVYQEKFHYIMVDEYQDTNGVQFELVSLLAGKYK
NLCVVGDDDQSIYAFRGADITNILNFEEVYPQAKVIRLEQNYRSTKNILAAANAVIANNN
SRKDKALWTENTTGYKLKYKSAENEKEEARFLTEEINRQRQNGRDYNDFAVLYRTNAQSR
SVEEGFVKAGIPYTLIGGVAFYQRKEIKDIIAYLRMISNHRDNVSFLRIINEPRRGIGDK
SLEELQKIALQKDCSFLEAAGQCRTAGFRGAAAVSEFYEIIQYLKAKLAEGIALEDWIKL
VLEKTKYTAELLKEGTPESLGRIDNINELISKAKEYTLQNEEPTLDGFLEDVALVASVDT
LEEDAKRVVLMTIHSAKGLEFPVVFMIGMEENLFPSYMSVNSGLEKDVEEERRLAYVGIT
RAKEELFLTNAKERLMYGKTQVNPKSRFLKEIPPEYVEEIVPVKEKTSLFAVESKAGRDF
GRSKAAMNRKPYAAGKTEIPAPQGKALDYGVGDLVKHKKYGIGQVLSIENGGADYQVKVL
FPGHGEKKLLAQLAGLTKQE
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaatagagatgcggaattaaataaggaacaaagagaagcggttcagtctacggaaggg
cctttgcttttgctggccggagcgggttccggcaaaaccaaggtgctgacccatcgaatc
gcttatttgattgaagaaaagggtgtgaggccttggcatatcatggcgattactttcacc
aataaagcggccaaggaaatgcgcgagcgaattgaccgtctaattggcgatgccgcggcg
gagatttgggtcagcacttttcacagcagttgtgtccggattttaaggcggcatgccgat
gcggttggctttgaccggagcttcagcatctatgacgcggaagattccaagaagctgatt
aagcaggttttaaaggaaatgaatattgacaccaaggcgctgtcggagtcttatgttgcc
aatttgatcagctctgccaaaaaccgtaagctgacgccgccggagctggcaagagaggtc
aggggcgattttcgccgggaaatggcagtcagagtgtatgagaattatcagcagcagctc
catcaaaataacgccatggattttgacgatttattgatgatgacggtacagctgtttgaa
tcaaatccggatattttagcggtttatcaggaaaagtttcattatattatggttgatgaa
tatcaggacaccaatggcgtacagtttgagctggtcagcctgctggccggaaaatacaag
aacttatgcgtggtcggtgatgacgaccagtcaatttatgcctttcggggagcggatatc
accaatattttaaactttgaagaggtgtacccgcaggccaaggttattcggctggagcag
aattatcgctcgaccaaaaatattttggctgcggccaatgccgtgattgccaataacaac
agccgaaaggataaagcactgtggacggaaaatacgaccggctataagttgaaatacaaa
agtgcggaaaacgaaaaggaagaagcccgtttcctgacggaggagattaatcggcagcgc
caaaacggccgggattataatgattttgctgtgctgtaccggacgaacgcgcagtcccga
agcgtggaggaaggctttgtcaaggctgggattccctatacgctgattggcggagtcgcc
ttttatcagcgtaaggaaataaaggatatcatcgcctatttaagaatgattagcaatcat
agggataatgtgtctttcctgcggattatcaatgagcccagacgcggcatcggcgacaaa
agtttggaagagttgcagaaaattgcgctgcaaaaggactgctcctttctggaagcggcc
gggcagtgccggactgccggttttcggggagcagcggcggtatcggagttttatgaaatc
atacagtatttaaaagctaagctggcagaggggatagctttagaggactggattaagctg
gtgctggaaaagaccaaatatacggcagaactgcttaaagagggcacgccggaaagtctt
ggccggattgacaatatcaacgaactgatttccaaggccaaggaatataccctgcaaaat
gaagaaccgactttggacggctttttggaggatgtggctttggtggcatcggtggatacc
ttggaagaagatgccaaaagagtggtgctgatgacgattcactccgccaaaggcttggag
tttccggttgtctttatgattggcatggaggaaaatttgtttcccagctatatgagtgtt
aattccggtctggaaaaagatgttgaggaagaaaggcgtttagcttatgtcggcattacc
cgggccaaggaggagttgtttttgacgaatgccaaagagaggctgatgtacggcaaaact
caggtcaatcccaagtcccgctttttaaaagagattccgccggaatatgtggaggagatt
gtgcccgtgaaagaaaagacatcgctttttgcggtcgagagcaaggccggtcgggacttt
ggtaggagcaaagcggcgatgaaccgcaagccttatgccgccggcaaaacggaaattccg
gcaccgcagggcaaagctttggattacggagtcggcgatttggttaagcataaaaaatat
ggaatcggtcaggtgctgagcattgaaaacggcggggctgattatcaggttaaggtgctg
tttccgggacatggcgagaaaaagctgctggcgcagttagcagggctgacgaagcaggaa
taa
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