Lachnospiraceae bacterium oral taxon 500: C3V36_09505
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Entry
C3V36_09505 CDS
T05749
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
lbw
Lachnospiraceae bacterium oral taxon 500
Brite
KEGG Orthology (KO) [BR:
lbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbw03400
]
C3V36_09505
DNA repair and recombination proteins [BR:
lbw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
C3V36_09505
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GFIT
Motif
Pfam:
Vsr
DUF7684
Motif
Other DBs
NCBI-ProteinID:
AVM69458
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All DBs
Position
2092397..2092753
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AA seq
118 aa
AA seq
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MWNKGFRYRLNYKELPGSPDLYIPKYWVAIFVNGCFWHMHENCRYSSIPKNNHDFWKNKL
EGNVERDKQNYIKLENRGFKVIVVWECEIKKVMKDEVISKQYMDTILYEITNSMKCKN
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atatggaataaggggttcagatatagattaaactataaggagttgcccggaagtcctgat
ttatatattcccaaatactgggttgctatttttgtaaacggttgcttttggcacatgcat
gaaaattgcaggtattcatccattcctaaaaacaatcatgatttttggaaaaacaaactt
gaagggaatgttgaaagagataagcaaaactacatcaaacttgaaaacaggggctttaaa
gtgatagtggtttgggaatgtgaaattaaaaaggtgatgaaagatgaagtaatttcaaag
cagtatatggatacaattttatacgaaattacaaacagtatgaagtgtaagaattga
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