Lachnospiraceae bacterium oral taxon 500: C3V36_12900
Help
Entry
C3V36_12900 CDS
T05749
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
lbw
Lachnospiraceae bacterium oral taxon 500
Pathway
lbw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C3V36_12900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbw03400
]
C3V36_12900
DNA repair and recombination proteins [BR:
lbw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C3V36_12900
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C3V36_12900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
SMC_N
nSTAND1
AAA_29
AAA_15
AAA_16
DnaJ_CXXCXGXG
ATPase
RsgA_GTPase
Viral_helicase1
AAA_25
AAA_23
MobB
BCA_ABC_TP_C
AAA_22
cobW
Anti-TRAP
DUF463
RecA
Motif
Other DBs
NCBI-ProteinID:
AVM70062
UniProt:
A0A2R3N2D5
LinkDB
All DBs
Position
complement(2822215..2824761)
Genome browser
AA seq
848 aa
AA seq
DB search
MGVNKKMPPANMEVRGAKVHNLKNIDIDIPLNQIVGIAGVSGSGKSSLALGVLYAEGSRR
YLESLSTYTRRRMTHAERADVEEVRYVPAALALHQRPGVPGIRSTFGTMTELLNSLRLMF
SRLASHRCPNGHYVKPSFAVAAMQEITCPECGEKFYGPGAEDLAFNSRGGCTACAGTGYV
RKVDESKLVPNEELTIDEGAVVVWGTLMWALMKDVCREMGVRTNIPFKDLTPAEKEIVYH
GPAEKKHILYVNPKTSQAAEMDFTYYSAVYTVENALSKVKDDTGMKRIEKFLTEAVCPDC
HGTRLSEASRAPRLRGIGLDEATAMTLNDLIPWVQGLPNTVPAEMRLMAENICESFMDNA
DRLIELGLGYLSLDRAAATLSTGERQRVQLARAVRNRTTGVLYVLDEPSIGLHPYNLKGL
TKVMDDLTADGNSVVLVDHDTQVLAHADYIVEMGKGAGADGGTVIATGSVSEIEENTQSI
IGPYLSREREFEKNRQNTSNRGATGRQGEGNSTAGTDIFSIGKIQLSTESIHTVKPLQAD
IPKGRLTVVTGVSGSGKTTLILESLIPALEAKAAGVKLPPHIKTINPAGIYQVKLIDATP
IGINVRSTVATYAGVHDELRKIYAKTEEAKAQKYKAGDFSYNTGQLRCPTCDGTGEISLD
IQFLPDVEMICPDCRGSRYGKLAGKVRRQFGSGKRYSLPDLMSMSVDEVLKDCEDLKLVR
QKLQVLHDLGLGYLTLGEKTPGLSGGEAQRLKLAAEMGKGQEDSLFVFDEPTIGLHPEDV
KVLLAVFANLIRLGATVIVIEHDLDVIRSADYVIDLGPGGGEAGGRIVAAGTPADIRNNP
DSLTGRFL
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgggagtaaataaaaaaatgccgccggcaaacatggaagttcgcggtgcgaaggttcat
aatttaaaaaacatagatattgatatcccgcttaatcagattgtcggtatcgccggggta
tcaggctcaggcaaatcctcgctggctttaggggttttatatgcggagggttcaagaaga
tatttggagtcgctgtccacttacacccgaaggcggatgacgcatgcggagcgagctgat
gtggaggaagtccggtatgtgccggccgcattggcgctccatcaaaggccgggagttccg
ggaattcgcagcactttcggaacgatgaccgaactgctcaatagtctgcgcctgatgttt
tcccggctggccagtcatcgctgccccaatggccattatgtcaaaccgtcttttgcagtg
gccgccatgcaggaaatcacctgcccggaatgcggggaaaagttttacggtccgggagcc
gaggacttggcgttcaacagccgaggcggctgcacagcctgcgccggtacgggttatgtc
agaaaggtagatgagtccaagttggttccgaatgaagaactgacgattgacgagggagcg
gtcgtggtctggggaactttaatgtgggcgctgatgaaggatgtttgccgggaaatgggg
gtacgcaccaatattccgtttaaagacctgacaccggccgaaaaggaaatcgtttatcat
gggccggcggaaaaaaagcatattttatatgtgaatcctaaaaccagtcaggctgcggag
atggactttacttattacagcgcggtatatacggttgaaaatgccttatcgaaagtaaaa
gacgatacggggatgaaacgaattgagaagtttttaaccgaagcggtctgcccggattgt
catggcaccagattgtctgaggcttcccgagcgccaaggctgcgcgggatcggtctggat
gaggccacggcgatgaccttaaatgatttgatcccgtgggtgcagggtttgccgaatact
gtgccggcggaaatgcggctgatggccgagaatatctgcgaatcgtttatggataatgca
gatagattgatagagctgggtttgggttatttgtctttagaccgggcggctgccacttta
tccaccggtgagcggcaaagagtgcagctggccagggcggttcgaaaccgaacgaccggc
gtgctgtatgtgctggatgagccgtcaatcgggctgcatccgtacaatttaaaagggctg
accaaggtgatggacgatttgacggcggacggcaattcggttgtgctggtcgatcatgat
acgcaggtgctagcgcatgccgattatattgtggaaatgggcaagggagccggagcggat
ggcggtacggtcattgcgaccggttcggtttctgaaatagaagagaatacgcagtctatc
atcgggccatacttaagccgggaaagggagtttgagaaaaaccggcagaacacctccaac
agaggggcgacaggccggcagggcgaagggaacagcactgccggtacggatatcttttcc
attggcaaaattcagctatcgaccgaaagtatccatacggtgaaacctttgcaggcggat
attcccaaaggcaggttgacggtcgttacgggtgtatcgggttcgggcaaaaccactttg
attttagaaagtctgattccggcgttggaagcaaaagcggccggtgtgaagctgccgcct
catattaaaacgattaacccggccgggatttaccaggttaagctgattgacgctacaccc
atcggcataaacgttcgttccaccgttgccacctatgccggggttcatgatgagcttcga
aagatatacgccaaaacggaggaagcgaaagcccaaaagtataaagccggagatttctcc
tataataccggtcagctccgctgcccgacctgtgacggtaccggggaaatatcgcttgat
atccagttcctgccggatgtggaaatgatttgcccggattgccgaggctctcgctatggg
aaattggccgggaaagttcggcggcagttcgggagcggtaagcgctacagcctgccggat
ttgatgagcatgagcgtagatgaggtgcttaaagattgtgaggatttgaaattggtgaga
caaaagcttcaggtcttacatgatttgggtcttggctatcttacgctgggcgaaaaaacg
ccggggctttccggcggagaagcgcagcggctgaagctggctgcggagatgggaaaaggg
caggaagattcgttatttgtctttgatgagccgacgattggcttgcacccagaggatgta
aaagtattgctggcggtatttgccaatcttatccggttgggggcaacggtgattgtgatt
gaacatgatttggacgtaatcagaagcgccgattatgtgattgacctcggccccggcggg
ggtgaggccggcggccggattgttgcggccggaacgccggccgatattcggaacaatccg
gacagcctgaccggccggtttttatga
DBGET
integrated database retrieval system
