Lachnospiraceae bacterium oral taxon 500: C3V36_13505
Help
Entry
C3V36_13505 CDS
T05749
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lbw
Lachnospiraceae bacterium oral taxon 500
Brite
KEGG Orthology (KO) [BR:
lbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbw03032
]
C3V36_13505
03400 DNA repair and recombination proteins [BR:
lbw03400
]
C3V36_13505
Enzymes [BR:
lbw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C3V36_13505
DNA replication proteins [BR:
lbw03032
]
Prokaryotic type
DNA Topoisomerases
C3V36_13505
DNA repair and recombination proteins [BR:
lbw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C3V36_13505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-ProteinID:
AVM70176
UniProt:
A0A2R3N2Q7
LinkDB
All DBs
Position
complement(2955304..2957385)
Genome browser
AA seq
693 aa
AA seq
DB search
MAKNLVIVESPAKAKTIKKFLGKNYTVEASMGHVRDLPKSSLGVSPENDFEPKYITIRGK
GPLIANLKKEAKKADKIYLATDPDREGEAISWHLQTILESIKAPIYRITFNEITKQAVSS
SIKKARPIDMDLVDAQQARRVLDRIVGYKISPLLWAKVKKGLSAGRVQSVALHLICEREK
EIEAFLPQEYWTLQLDLTDAKGKNKFRADFYGADGKKIELGSEAETEKVLVELSREKPVL
TEKKESTRRRSAPLPFKTSTLQQEAAKALNFTTAKTMRLAQQLYEGVDIPGRGTLGLITY
LRTDSVRVAEEAAAAADEQIRSAYGEKYLRTDAPKETKKGRSQDAHEAIRPSVPELSPAE
VKEALGRDLFRLYQLIWRRFMASRMAAAEYKSERLTIRAGEYELRASGQSLEFDGYLKLY
QEFEEEESGTEASISDFAGLKQGAALKIKDSQKQQHFTQPPARYTEASLVKLLEENGVGR
PSTYAPTISTILARGYVAKEQKSFFPTELGEIVDAIITKYFDDIVNIDFTAEMEEKLDRI
EDGNCDWRTPLREFYPELAADVERAEQELEKVEIKDEETDILCEKCGRNMVIKLGRYGKF
LACPGFPECSHTKPYFEVLPGVLCPKCGGAVQIKKTKKGRRYFGCENNPECDFMVWNEPV
AKKCERCGSMMLRKGKKILCSNEACKHIEDADE
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaatttggtaattgtagaatctccggccaaggccaaaacaatcaaaaagttt
ttgggcaaaaattatacggtggaagcgtcgatgggacatgttcgggatttgccgaaaagc
agtttgggggtttctccggaaaatgattttgagccgaaatatattacgattcgcgggaaa
gggccgctgattgcaaacctgaagaaagaggctaaaaaagcggataagatttatctggcc
actgaccctgaccgggagggcgaagcaatatcctggcatttgcagacgattttggaaagt
attaaagcgccgatttaccggattacttttaatgagattaccaaacaggcagtatcctct
tcgatcaaaaaagccaggccgattgatatggatttggtggacgctcagcaggccagacgg
gtgctggatcggattgtcggctataaaatcagtccgctgttgtgggccaaggtcaagaaa
gggctgtcggccggtcgggtacagtcggtggcgctgcatttaatctgcgaaagggaaaag
gagattgaggcttttttgccgcaggaatattggactttacagctggatttgacggatgcc
aaagggaaaaataagtttcgggcggacttttacggcgcagacggcaaaaaaatagaatta
ggcagtgaagcggaaacggaaaaggttttggtggagttgtcccgggaaaagccggtgctg
actgagaagaaagaaagcacccgtcggcggagcgcaccgctgccgtttaagaccagcacc
ttgcagcaggaagcggctaaggcgctgaactttaccactgccaagaccatgcggctggct
cagcagctgtatgaaggcgtggacattccggggcgggggactttgggtctgatcacctat
ttaagaaccgattcggttcgggttgccgaagaagcggcggcagcagccgacgagcaaatc
cgcagtgcatacggtgaaaaatatttgcggacagacgcgccgaaggagacaaaaaagggc
cgaagccaggacgcgcatgaagccatccggccatctgtgccggagctttctccggccgag
gtcaaggaagccctcgggcgggatttgttccgtctgtatcagctgatttggcggcggttt
atggccagccggatggcagcggccgaatataaaagcgaaagactgaccattcgggccgga
gagtatgaactgcgcgcttccggtcaaagcctggagtttgatggttatttaaaattgtat
caggagtttgaggaagaagaaagcggaacggaagcgtccatcagtgattttgcgggtcta
aagcagggcgcagctttgaaaataaaggacagccagaagcagcagcattttacccagccg
ccggctcgctacaccgaagcctctttggttaaacttttggaggaaaacggagtcggccgg
cccagcacctacgcgccgacaatcagtacgattctggccaggggttatgtggccaaggag
caaaaatcctttttcccgacagagctcggggaaattgtggatgcgattattaccaaatat
tttgacgatattgtcaatattgattttacagccgaaatggaagaaaagctggatcggatc
gaggacggcaactgcgactggcggacaccgctgcgggagttttacccggaactggcggcc
gatgtggagcgggcggagcaggaattggaaaaagtagaaatcaaggacgaagaaaccgat
atcctctgtgaaaaatgcggccgcaatatggtaattaagctggggcgctacggtaaattc
ttggcttgtccgggctttcccgagtgcagccataccaagccttattttgaggtgcttccc
ggggtgctttgtccgaaatgcggcggtgcggtgcagattaagaagaccaaaaaaggccgg
cgctattttggctgcgaaaataatccggagtgcgattttatggtgtggaatgaaccggtg
gccaagaaatgtgaacgctgcggttcaatgatgctgcgcaagggtaagaaaattctttgc
tccaatgaagcatgcaaacatattgaggatgccgacgagtaa
DBGET
integrated database retrieval system
