Lachnospiraceae bacterium KM106-2: lbkm_0044
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Entry
lbkm_0044 CDS
T08927
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lbx
Lachnospiraceae bacterium KM106-2
Brite
KEGG Orthology (KO) [BR:
lbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbx03016
]
lbkm_0044
Enzymes [BR:
lbx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
lbkm_0044
Transfer RNA biogenesis [BR:
lbx03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
lbkm_0044
Prokaryotic type
lbkm_0044
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
BBF41370
UniProt:
A0A7U6QHA0
LinkDB
All DBs
Position
41407..42213
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AA seq
268 aa
AA seq
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MTEKLILLGTGHATVTKCYNTCFAVRKEEEFFLVDAGGGNGILAQLEKAEIPLERIHHIF
LSHEHTDHILGMVWMIRMIGTKINKGKYDGKLHIYCHSDLCEALLTIVRLTLQGKLVNLI
GDRILLHSVEDGQQKDILGYEVTFFDINSTKAKQYGFTTKLANGKKFTFLGDEPYRECEY
EYAVNADWLLHEAFCLDSEKEIFQPYEKHHTTAADACKMAQDLGAKNVILYHTEDKNLAS
RKELYTKEGQQYFKGNLFVPDDLETYEL
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaagttaattttattaggtaccggacatgcaacggttacaaaatgctataat
acttgctttgcagtgagaaaagaagaggagttcttcttagttgatgcagggggcggaaat
ggaattcttgcacagctagagaaggctgagattccgctagagagaattcatcatatcttc
ttaagtcatgaacatacagatcatattcttggaatggtgtggatgatccgtatgatcggt
acgaaaataaataagggtaaatatgatggtaagttacatatttattgtcatagcgatctt
tgtgaggcattgttgacgatcgtgcgccttacgctgcaagggaaacttgtgaatttgatc
ggagatcgcattctccttcattcggtagaagatggacagcaaaaggatattttaggatat
gaggttacgttctttgatattaattctacgaaagccaaacagtatggctttacaacgaaa
cttgccaatgggaagaaatttaccttcttgggagatgagccatatcgtgaatgtgagtat
gaatacgcggtgaatgcagattggctactacatgaggcattttgtcttgattcggagaaa
gagatctttcagccatatgagaaacatcatacgacggcggcagatgcttgtaagatggcg
caagatcttggcgctaaaaatgtgattttatatcatacagaagacaagaatcttgcaagt
cgtaaggagctctatacgaaagaaggacagcagtactttaagggaaatttatttgtcccg
gatgatctggaaacatacgagctgtag
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