Lachnospiraceae bacterium KM106-2: lbkm_0087
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Entry
lbkm_0087 CDS
T08927
Name
(GenBank) heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lbx
Lachnospiraceae bacterium KM106-2
Pathway
lbx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
lbkm_0087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbx03019
]
lbkm_0087
03110 Chaperones and folding catalysts [BR:
lbx03110
]
lbkm_0087
03029 Mitochondrial biogenesis [BR:
lbx03029
]
lbkm_0087
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lbx04147
]
lbkm_0087
Enzymes [BR:
lbx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
lbkm_0087
Messenger RNA biogenesis [BR:
lbx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
lbkm_0087
Chaperones and folding catalysts [BR:
lbx03110
]
Heat shock proteins
HSP60 / Chaperonin
lbkm_0087
Mitochondrial biogenesis [BR:
lbx03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
lbkm_0087
Exosome [BR:
lbx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
lbkm_0087
Exosomal proteins of other body fluids (saliva and urine)
lbkm_0087
Exosomal proteins of breast cancer cells
lbkm_0087
Exosomal proteins of colorectal cancer cells
lbkm_0087
Exosomal proteins of bladder cancer cells
lbkm_0087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BBF41413
UniProt:
A0A7U6KCR0
LinkDB
All DBs
Position
85017..86630
Genome browser
AA seq
537 aa
AA seq
DB search
MAKELKYDVDARKALEAGVNKLADTVKVTLGPKGRNVVLDRGFGSPLITNDGVTIAKEIE
LECPFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMVNEGMKNLAAGANPIILRKGMK
KACDKAIEALKKMSSPVSGKSHIAKVATISSGSEEVGEMVADAMEKVSDNGVISIEESKT
MKTELDVVQGMQFDRGYVSSYMVTDTDKMEARLEDPYILITDKKISNIQEILPLLEEIVK
QGKQLLIIAEDVEGEALSTLIVNKLRGTFNVVAVKAPGYGDRRKEMLQDIAILTGGTVIS
DEVGLALKDTKLEQLGKAKSVTIQKETTTIVDGLGEKKQIEDRINKIKHQLADTTSSFDK
EKLQERLAKLAGGVAVVRVGAATETEMKEAKLRMEDAINATKAAVEEGIIAGGGSAYIHC
TNEIKSLADSLEGDEKTGVNIILKALEAPLLTIAKNAGYEGAVIVDAVKKLETGKGFNAY
TGEYVDMVENGVIDPVKVTRSALENAVSVASSLLTTEAVVATKKENKKNEMVNNQMM
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaactgaagtatgatgtagatgcaagaaaagctttagaagcaggtgtaaat
aaattagcggataccgtcaaggtgacattaggaccaaaaggaagaaatgtggtattagat
cgtggatttggaagtcccctaattaccaatgatggtgttacgatcgcaaaagaaatagaa
ctagagtgtccatttgaaaatatgggtgcacagctagtgaaggaagttgcaacaaagact
aatgatgttgctggtgatggtaccacaacagcaactgtcttggcacaggctatggtgaat
gaaggtatgaagaatctggcggcaggtgcaaatcccatcattttaagaaaaggaatgaag
aaggcttgtgataaagcaattgaagcattaaagaaaatgagttctcctgtatcaggtaaa
tctcatatcgctaaggttgcaacaatttcttctggttcggaagaagtcggtgagatggta
gcagatgcaatggagaaagtcagcgataacggtgtcatctcaattgaagaatcaaagaca
atgaagaccgaattagatgtcgtacaaggaatgcagtttgaccgaggttatgtatcttcc
tacatggttacggatacggataaaatggaagcaagactagaggatccgtatatcctgatc
accgataagaagatatcaaatattcaagaaatcctccctcttcttgaagaaatcgtaaaa
caaggaaaacaattattaattatcgctgaagatgtggaaggcgaagcattatctacactg
atcgtaaataaattaagaggcacctttaatgtggttgctgtcaaagcaccaggatatggt
gacagaagaaaagaaatgttacaggatatcgctattttaacaggtggtacggtaatatca
gatgaagttggacttgctcttaaagatacaaagttagagcaattaggtaaggcaaaatca
gtgacgatccagaaggagacaactactatcgtagatggtcttggagaaaagaaacagatc
gaggatcgtatcaataagatcaaacatcagctcgctgatacaacttctagttttgataaa
gaaaaattacaagagcgattagctaaattggctggtggagttgcagttgttcgtgtcggt
gccgcaaccgagacagaaatgaaggaagcgaaacttcgtatggaagatgccatcaatgca
acgaaggcagcagtagaagaaggtatcatagccggtggtggttctgcatacatccactgt
acaaatgagatcaagagccttgctgatagcttagaaggtgacgaaaagacaggtgttaat
attattctgaaggcattggaagcccctcttcttacaattgcaaagaatgccggttatgaa
ggtgctgtgattgtagatgccgttaagaagttagagacaggtaaaggattcaatgcttat
actggtgagtatgtcgatatggttgagaatggtgttatcgatcctgtgaaggtaactcga
agtgctcttgagaatgcagtcagcgtcgcttcttccctccttacaacagaagcagttgtt
gcaacaaagaaagagaataagaaaaatgaaatggtaaataatcaaatgatgtaa
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