Lachnospiraceae bacterium KM106-2: lbkm_0555
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Entry
lbkm_0555 CDS
T08927
Name
(GenBank) transcriptional antiterminator of lichenan operon, BglG family
Organism
lbx
Lachnospiraceae bacterium KM106-2
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRD
HTH_11
HTH_Mga
Mga
Hydrolase_3
PuR_N
UPF0122
MarR
MarR_2
VWA7_N
Motif
Other DBs
NCBI-ProteinID:
BBF41875
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Position
583639..585096
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AA seq
485 aa
AA seq
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MFSPRQEYLVKTLMRKATELEPEYLCKKLSVSGRTLREDVKEINEFLHDYGVGIYLSSTG
KYYISEDDKDKINQIIVMHEIESEWVPESKTQREFYIIMRLLYEEDYLTMDEIGKEIYVS
KASISHDVKRIDDYIFEVTKTRMDISKAKGIRLLTNELGKRRLLFSLIYKNYDIDAKYLM
KMFIHFQLGSREEFSTLWKIYEEFFEQNELISTHISFATILLETIACTGRIRQGYVIEDY
DREEVEFKLALPFERIEDTFHMVFPKAEKQLLQEVFHTKRMLVNQEEVTPTKFLIRQILV
DFVEVIKEKYEIDLEQDYEQMKQLKAHLNAMVSRLLLSYHEDEYIAGKIKSEYPKEYEMA
AEITPIIKKYLNLDITEVEQAYIAMHVGAIVEHLKKTVHAIIISNSTAVMIQMLQKKLQQ
SFYGQLVVDGCFPVNQLEFAIECIPQIDVILATHSLKKKVDIPVLKLNEFYEKEDWVIIN
DFINS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgcctaggcaggaatatttagtgaaaacgttaatgagaaaagcaacggaatta
gaaccagagtatctttgtaagaagttatcagtatctggcaggacgcttcgtgaagatgta
aaggaaattaacgagtttttacatgattatggtgttgggatttatttatcatcaaccggt
aagtattacataagtgaagatgataaagataagattaatcagattatcgtgatgcatgaa
attgaaagtgaatgggtcccagaaagtaagacacagagagaattttatattatcatgcgt
cttttgtatgaggaagattatctgacaatggatgagatcggaaaagaaatctatgtctct
aaggcaagtatttctcatgatgtgaagcgaattgatgattatatatttgaagtaactaag
acgagaatggatatttctaaagcaaagggaattcgactacttacgaatgagttaggaaag
cgaagacttttgttttccttaatctataaaaattatgatattgatgccaaatacctgatg
aagatgtttattcattttcaattgggatcaagagaagaattcagtacgctatggaaaatc
tatgaggagttctttgaacaaaatgagctgatctcaacacatattagttttgctacgatc
cttcttgagacaatcgcttgcacgggaaggatccgtcagggatatgtgatcgaagactac
gatagagaagaagtggagtttaagttagcactaccttttgaaaggattgaagataccttt
catatggtatttccaaaagctgagaagcagcttctacaggaagtatttcatacaaaacga
atgttagttaatcaagaagaagtgactccgactaagtttttgatccgacaaatactggtc
gactttgtggaagtgatcaaagagaaatatgagatcgatctggaacaggattacgagcag
atgaaacagctgaaagcacatttaaatgccatggtgagtcggctgttattgtcctatcat
gaagatgagtatatcgcaggcaagattaaaagtgagtatccgaaagaatatgagatggca
gcagagatcacaccgatcataaagaaatatctgaatcttgatatcacggaggtggagcag
gcttatattgcaatgcacgtgggtgccatcgtagagcatctgaaaaagacagttcatgct
atcattatcagtaatagtacggcggttatgatacagatgctgcaaaagaagcttcaacaa
tccttttatggtcaattagtcgtagatggctgtttcccggtgaatcagctagaatttgca
attgagtgtattccacagattgatgtgattttagcgactcattctctgaagaaaaaggta
gacattccggttctaaagctcaatgagttttatgagaaagaagattgggttattattaat
gattttataaatagttaa
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