Lachnospiraceae bacterium KM106-2: lbkm_0720
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Entry
lbkm_0720 CDS
T08927
Name
(GenBank) uracil-DNA glycosylase, family 1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lbx
Lachnospiraceae bacterium KM106-2
Pathway
lbx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
lbkm_0720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbx03400
]
lbkm_0720
Enzymes [BR:
lbx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
lbkm_0720
DNA repair and recombination proteins [BR:
lbx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
lbkm_0720
Prokaryotic type
lbkm_0720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BBF42038
UniProt:
A0A7U6KDR6
LinkDB
All DBs
Position
729759..730463
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AA seq
234 aa
AA seq
DB search
MITKYDASWAEFLTVERLDMLKKIEEQIGADYTPKKENILRFLKQDLNEKKVIWLGQDPY
FQPEVANGRSFQPDSLNRWDDKFKQVSLKNIIRLVHKSYFKFEHYEEIASYKEIVKQIST
GEFPIKQPKEWFDSLERQGVLFLNTSFTCTVNEPNSHKDIWKEFSRELLAYIDEKRPDMI
WFLWGKEAIKNVEFLKNGVRYESRHPMMCSSKYDDDFLKSKCFLNTFDRINWLG
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgattacaaaatatgatgcatcatgggctgagtttttaactgtggaacgactcgatatg
cttaagaagatcgaagagcagatcggagcagattatacaccgaagaaagagaatatatta
cgctttttaaagcaggatttaaatgagaagaaggtaatctggctaggtcaggatccttat
tttcaaccggaagttgcgaacggaagatcttttcagccggatagtcttaaccgatgggac
gataaatttaaacaggtaagtttaaagaatattatccgtttggttcataagtcttacttc
aagtttgagcattatgaagagatcgcttcttacaaagaaatcgtaaagcagatcagtacg
ggtgagttcccaattaaacagccaaaagaatggtttgattcgttagagagacaaggggta
ctatttcttaatacttcatttacttgtacggtaaatgaaccaaatagccataaggatata
tggaaagagttttctagggagcttcttgcttatattgatgagaagagacccgatatgatc
tggttcttatggggaaaagaagctattaaaaacgtggagttcttaaagaatggggttcgt
tatgaatcaagacatccgatgatgtgctcttccaaatatgatgatgattttcttaaatca
aagtgtttcttaaatacatttgatagaattaattggttaggttaa
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