KEGG   Lachnospiraceae bacterium KM106-2: lbkm_0873
Entry
lbkm_0873         CDS       T08927                                 
Name
(GenBank) signal recognition particle, subunit Ffh SRP54
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
lbx  Lachnospiraceae bacterium KM106-2
Pathway
lbx02024  Quorum sensing
lbx03060  Protein export
lbx03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lbx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    lbkm_0873
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    lbkm_0873
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    lbkm_0873
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lbx02044]
    lbkm_0873
Enzymes [BR:lbx01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     lbkm_0873
Secretion system [BR:lbx02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   lbkm_0873
  Eukaryotic Sec-SRP protein
   lbkm_0873
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_33 AAA_22 cobW ParA APS_kinase AAA_31 ArlS_N ArsA_ATPase TctA AAA_30 AAA Thymidylate_kin AAA_19 KTI12 nSTAND3 VirC1 AAA_17 NPHP3_N Diphthamide_syn CLP1_P ResIII
Other DBs
NCBI-ProteinID: BBF42191
LinkDB
Position
911709..913055
AA seq 448 aa
MAFESLSDKLQNVFKNLRGKGRLTEADVKAALREVKMALLEADVNFKVVKNFIKSVQERA
IGQDVLTSLTPGQMVIKIVNEEMVKLMGDETTEIDLKPTQEITIILMCGLQGAGKTTTTA
KIAGKLKQKGRKPLLVACDVYRPAAIKQLQINGEKQGVEVFSMGDGHKPVNIAKAAVEHA
KSNGLNVVILDTAGRLHIDEDMMAELIEIKENVDVHQSILVVDSMTGQDAVNVAEMFNEK
IGVDGVILTKLDGDTRGGAALSIRAVTGKPILYIGMGEKLSDLEQFYPDRMASRILGMGD
ILTLIDKAQAEIDEDKAKDLEKKIRKAEFDFNDFLDTMSQMKNMGGLSSIIGMLPGVGSQ
LKDVEINDDAFKGVEAIIYSMTKEERANPSLLNPSRKKRIANGAGVDISEVNKLVKQFDQ
SRKMMKQMSGMMSGKGAKRGRFKLPFGL
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggcatttgaaagcttatccgataaacttcagaatgtatttaagaatttacgtggtaaa
ggaagacttactgaagctgatgtaaaagctgctttaagagaagttaaaatggcattatta
gaggccgatgttaactttaaagtagttaagaatttcataaaatccgttcaagaacgagca
attggacaagatgtactaacaagcttgacaccaggacaaatggtgatcaagatcgttaat
gaagaaatggtaaaattgatgggtgatgagacgactgagatcgacttaaaacctacgcag
gaaattacgattatcttaatgtgtggtcttcaaggtgctggtaaaacaactactacagcg
aagatcgcaggaaagttaaaacaaaaaggcagaaagcctttattagttgcttgtgatgtt
tatcgtccagccgcgatcaaacagttacagatcaatggtgaaaagcaaggggtagaggta
ttctccatgggagatggccataaacctgtgaatatcgcaaaagctgcggtagagcatgca
aaatccaatggtttaaacgtagttatcttagatacagctggtcgtcttcatattgatgaa
gatatgatggcggaattaattgaaattaaagagaatgtggacgttcatcaatccatcctc
gttgtcgattcgatgacaggtcaggatgccgttaatgtagcggaaatgttcaatgaaaaa
attggtgttgatggtgttatcttaacgaagttagatggtgacacaagaggtggtgctgca
ttatccattcgtgcagtaacaggaaaaccaattctttatattggtatgggagagaagtta
tctgatctagaacaattctatccagatcgtatggcatctcgtatccttggaatgggcgat
attttaactttgatcgataaagcacaggctgaaatcgatgaagataaagcaaaagaccta
gaaaagaagattcgtaaagcagaatttgactttaatgatttcttagatactatgagtcag
atgaagaacatgggtggtctatccagtattattggtatgcttcctggtgttggttctcag
ctaaaagatgttgagatcaacgatgatgcttttaaaggtgtagaagcaattatttactcc
atgacgaaggaagagagagcaaatccttcgctacttaacccttctcgtaagaaacgtatt
gccaatggtgcaggcgttgatatcagtgaagtaaataagttagtaaaacagtttgatcag
tctagaaagatgatgaaacaaatgtctggcatgatgtcaggtaagggcgcaaaacgtggc
cgttttaaattaccatttggactatag

DBGET integrated database retrieval system