Lachnospiraceae bacterium KM106-2: lbkm_1015
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Entry
lbkm_1015 CDS
T08927
Name
(GenBank) cytoplasmic axial filament protein CafA and ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
lbx
Lachnospiraceae bacterium KM106-2
Brite
KEGG Orthology (KO) [BR:
lbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbx03019
]
lbkm_1015
03009 Ribosome biogenesis [BR:
lbx03009
]
lbkm_1015
Messenger RNA biogenesis [BR:
lbx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
lbkm_1015
Ribosome biogenesis [BR:
lbx03009
]
Prokaryotic type
rRNA processing factors
lbkm_1015
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
TamB
S1
STAS
DUF6231
Motif
Other DBs
NCBI-ProteinID:
BBF42333
LinkDB
All DBs
Position
1057640..1058827
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AA seq
395 aa
AA seq
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MSNKLVITKQKDQIISSLLEGNELVQVNASEAVTESLLGNIYVGKVKNIVKNISAAFVEI
QPDLMCYYSLEENKSPIYVKEKKNDKLVIGDELIVQVTKENIKTKAPVISSNFSLTGKYS
VLTHGKTNIGISGKIRSDETRERLKNLLLPYQNEEYGFVIRTNAADAPEEYLINELEGLI
EKYKEIKQFGVHKTIFSKLYESPAPYICDIRDGAARNIDAIVTDEVDIYENMKDYVSRFQ
REDLEKLEFYQDPMISLNNLYGISSKLEKALREHVWLKSGGYLVIQPTEALTVIDVNTGK
AIAGKKKAEETFFKINKEAAVEIAKQMHLRNLSGIIIIDFIDMLDENNKNELLKQLRDLC
AKDPIKTTLIDMTPLNLVEITRKKVRKPLHEQIKG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgagcaataaattagttatcaccaaacaaaaagatcaaatcatatcctccttgcttgaa
ggaaatgagcttgttcaagtaaatgcttcggaggctgtaaccgaaagcctccttggcaat
atctatgttggtaaagtaaaaaatatcgttaagaatatcagcgctgctttcgttgaaatc
cagccagatctcatgtgctactattctttagaagaaaataaatcgccgatttatgtgaaa
gagaagaagaatgataaattagtaatcggagatgagctcattgttcaagtaacaaaggaa
aatatcaagacgaaagcaccggtgatcagttctaactttagtctgactggaaaatattct
gtcttaactcatggaaagacgaatatcggtatctctggtaagatccgttcggatgaaacg
agagaacgacttaagaatctattattgccttatcaaaatgaggagtatggatttgtcatt
cgtaccaatgcagcagacgcaccagaagaatatctgatcaacgagctagaagggctgatc
gagaaatataaagagatcaagcagtttggggttcataaaacgatcttttctaagttgtat
gagagtccggcaccttatatctgtgatatccgagatggggccgctagaaatatcgatgcc
atcgtaaccgatgaagttgatatttatgagaatatgaaagattatgtaagcagattccaa
agggaagacttagagaagctggaattttatcaagatccaatgatctctttgaacaactta
tatggaatcagctcgaagttagaaaaagcacttcgtgagcatgtatggctaaaatcaggc
ggatatttggtcatccagccgactgaagccttaacggtaatcgatgttaatacaggaaag
gccattgccggtaagaagaaagcagaagagacgttctttaagatcaataaggaagctgct
gttgaaattgccaagcagatgcatcttcgtaatttatccggtattatcatcattgacttt
atcgatatgttagatgaaaataataaaaatgaattattaaaacaattgcgagacttatgt
gctaaagatccaattaaaacgacattaattgatatgacgccattgaatcttgtagagatt
acacgaaagaaagtacgtaagccattacacgaacaaataaaggggtaa
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